| VERSION.yml | 644 | 0 | 0 | | | 36 Bytes | 83a8a78a941b308a7bb846d65878f90692cbdfba852fb8e575230ea8d196e4a7 |
| README_DEV.rdoc | 644 | 0 | 0 | | | 9 KB | f301218691598b235e5b0a8603bde7b5bb302376f2b0eba14e101e666b152d13 |
| README.rdoc | 644 | 0 | 0 | | | 5.84 KB | f206f5b3f91aa44acac66502f181ee5222c97d88001b4147ddd31db936895404 |
| bin/br_bioflat.rb | 755 | 0 | 0 | | | 7.17 KB | 8d87c3730fe70eac916f8915b9472fde9ccace80208b0e01cda83f66d7780199 |
| bin/br_biogetseq.rb | 755 | 0 | 0 | | | 799 Bytes | 2ceea85a863d416213b4d4e1aebdb53cfbf3a6fd84fdb9f36c7a50a85bb32a60 |
| bin/br_pmfetch.rb | 755 | 0 | 0 | | | 9.93 KB | 32e4f61ffa9fea3ca79329241da004f5d81ffd7379cee7b3e5fa0d4b34649e46 |
| bin/br_biofetch.rb | 755 | 0 | 0 | | | 1.23 KB | c851dd31e33f68abf5d8af990db7e30ecb9c06af47a66034743e57784972a067 |
| bin/bioruby | 755 | 0 | 0 | | | 924 Bytes | a63d7ce0890c96f697a289f57f0dbf764b3b6692d6a49e660d527f1674a9872f |
| lib/bio.rb | 644 | 0 | 0 | | | 8.66 KB | 244ecc4ca74d9177471de4060c4318bd6c86c083e15d9f10dc0577ab20b6e537 |
| lib/bio/reference.rb | 644 | 0 | 0 | | | 18 KB | 8d01e9da2188572707391d96e9f3fa3c622ea4071ac5092b4ed0c1aca318856f |
| lib/bio/pathway.rb | 644 | 0 | 0 | | | 26.3 KB | 025ec6edd0a402ddab66b817c76af8783271b0374110a56527a85efbba37e567 |
| lib/bio/util/restriction_enzyme/single_strand.rb | 644 | 0 | 0 | | | 6.55 KB | 730d349107491337966a9450a9351143e8032eeaff23f3409d61391989df0d3c |
| lib/bio/util/restriction_enzyme/string_formatting.rb | 644 | 0 | 0 | | | 2.83 KB | 222f84fb60277208e57b30341fa3f7ba2867ea461c01aeff4c1b001d6cc4bc8d |
| lib/bio/util/restriction_enzyme/cut_symbol.rb | 644 | 0 | 0 | | | 2.65 KB | 486d4e9af1af0417779b3514701d7a748692b007a9645303f86e2ba02e919186 |
| lib/bio/util/restriction_enzyme/analysis_basic.rb | 644 | 0 | 0 | | | 8.21 KB | 2abfa2c7a42e0ca3c6f0aa857f044aaed1f22b6013159c7bb20c9d04ca7ac04e |
| lib/bio/util/restriction_enzyme/single_strand/cut_locations_in_enzyme_notation.rb | 644 | 0 | 0 | | | 3.97 KB | 6179c8fdd0d215eecd48e63a89121de5da1e228bdf7158d5d5c94f1222a91ab6 |
| lib/bio/util/restriction_enzyme/single_strand_complement.rb | 644 | 0 | 0 | | | 730 Bytes | 47d32c263f36934713f03c1d70d8f2fa0006a326c70bf7ff645eb65071d99cf1 |
| lib/bio/util/restriction_enzyme/enzymes.yaml | 644 | 0 | 0 | | | 87.5 KB | 56ed1fd2f2d5557604da2044f3d491ccc5b845c43b4b307b395fb89e3798b346 |
| lib/bio/util/restriction_enzyme/double_stranded.rb | 644 | 0 | 0 | | | 10.6 KB | 5d70feb8d68c4580c82efc1582d9084ce5ce5c35d6832753b579f4807e7518ca |
| lib/bio/util/restriction_enzyme/range/vertical_cut_range.rb | 644 | 0 | 0 | | | 2.5 KB | 7a189f653796e06b5666065f52815594373ee505b600a8414aad9db17755ef97 |
| lib/bio/util/restriction_enzyme/range/sequence_range.rb | 644 | 0 | 0 | | | 9.22 KB | c476ba4e8d13695c7aa1745ff91f39d2d938f246b900fec033a9e5b099456d8a |
| lib/bio/util/restriction_enzyme/range/cut_range.rb | 644 | 0 | 0 | | | 593 Bytes | cd3c8ec45c3405bc00eb6359e8cfae4d83b8153759b1e1496fe3b0c50a2bf97d |
| lib/bio/util/restriction_enzyme/range/sequence_range/fragment.rb | 644 | 0 | 0 | | | 1.27 KB | 9787b52acc8e9dc5ed6a283e85c719ef895b95fbc03d74726d2a6b4d414965a4 |
| lib/bio/util/restriction_enzyme/range/sequence_range/calculated_cuts.rb | 644 | 0 | 0 | | | 7.92 KB | ac87847488e0bc2464886afdcd360ef39e8f7efda273a03e0e425c3c24cbcdae |
| lib/bio/util/restriction_enzyme/range/sequence_range/fragments.rb | 644 | 0 | 0 | | | 949 Bytes | d9f9349d45f95f3e753b7b8650da42e032ac0bc3db6a8c5db0d4ec9b4c7a8573 |
| lib/bio/util/restriction_enzyme/range/horizontal_cut_range.rb | 644 | 0 | 0 | | | 1.79 KB | 09e37d064b972eb2495cc4e490b0b7abe045b18317c4fa93d7b5676c19faa328 |
| lib/bio/util/restriction_enzyme/range/cut_ranges.rb | 644 | 0 | 0 | | | 1.21 KB | 6367e63e557c219111df6e6d2006e7545db7d40082e7874a6bae643f870fc174 |
| lib/bio/util/restriction_enzyme/analysis.rb | 644 | 0 | 0 | | | 9.58 KB | ce30016b52ee7520e2cba5d83363c057a72a664c84f9a42a6fb2dd2a9fcb596f |
| lib/bio/util/restriction_enzyme/double_stranded/cut_locations.rb | 644 | 0 | 0 | | | 1.76 KB | 75460543e7cbc0f4892791acef7855df597d6904fceccdd999074725ba0fdf78 |
| lib/bio/util/restriction_enzyme/double_stranded/cut_location_pair.rb | 644 | 0 | 0 | | | 2.9 KB | 1fcd5f98ac571a6af6a1a13c4d74dc9eddd524454edd2d5b1c7f98ab858c4ae8 |
| lib/bio/util/restriction_enzyme/double_stranded/aligned_strands.rb | 644 | 0 | 0 | | | 4.08 KB | 6800d44c6e6a18e877d1b26b627eb305aee5dbba25cbf6c6909a09c4a2c91b99 |
| lib/bio/util/restriction_enzyme/double_stranded/cut_location_pair_in_enzyme_notation.rb | 644 | 0 | 0 | | | 1.02 KB | bef996cd083852621ca8ad4835467e0cec36c896641dddff73ef6601cbf6bfb6 |
| lib/bio/util/restriction_enzyme/double_stranded/cut_locations_in_enzyme_notation.rb | 644 | 0 | 0 | | | 3.17 KB | b52e94099dfdd4d82dc5cd5e05d0d25d6e70f2d1beab41ee6b38169c837b45b3 |
| lib/bio/util/sirna.rb | 644 | 0 | 0 | | | 7.33 KB | 26edd6daebc70387f61effdc8aaf917f3c8c5c0ae9174bf24211857bb0b2221a |
| lib/bio/util/contingency_table.rb | 644 | 0 | 0 | | | 11.6 KB | 9c5b597106ea06c49113f888a7c1a0bf6730a5e916f41751aff98d5e560ae7fd |
| lib/bio/util/color_scheme/strand.rb | 644 | 0 | 0 | | | 1.25 KB | 875060462cd79b26800c6a6122c21083fc55747ed85325162db2ac21038a18b1 |
| lib/bio/util/color_scheme/buried.rb | 644 | 0 | 0 | | | 1.24 KB | 9904524d8f999ef83de1568d72809c1999cece53397c655ef8776a78a38eafa9 |
| lib/bio/util/color_scheme/turn.rb | 644 | 0 | 0 | | | 1.24 KB | bd3eccff3a257ba853884956d26e8da73b68412375bf9531af7964a991ced74e |
| lib/bio/util/color_scheme/taylor.rb | 644 | 0 | 0 | | | 1.07 KB | 1af407d819e588fd266b4076e08849c3f7fe6211cd9799b8db2126286ee5e17e |
| lib/bio/util/color_scheme/nucleotide.rb | 644 | 0 | 0 | | | 690 Bytes | 826ecc72308f879c325103e36a5dbe51fe67ec5b9fcf32e73c133ceeaf80376e |
| lib/bio/util/color_scheme/zappo.rb | 644 | 0 | 0 | | | 1.07 KB | 4fbe84b2835206f44f0cf7ad95889c7c28f4a207ed015f86436dd5e47f534ce5 |
| lib/bio/util/color_scheme/helix.rb | 644 | 0 | 0 | | | 1.25 KB | 565b1a9f94431205873436ba4a2ab2a3e3267c9bf3e0cce246ef661c49109ef7 |
| lib/bio/util/color_scheme/hydropathy.rb | 644 | 0 | 0 | | | 1.34 KB | 8b827c40b823eb57874ecf65156a8ad9ef2ed1278be7050e3e8e7ba5f93061e3 |
| lib/bio/util/restriction_enzyme.rb | 644 | 0 | 0 | | | 7.96 KB | afd9d77484d5d21043ad573c87004e42678fc6d8e999fa452a509342602d156c |
| lib/bio/util/color_scheme.rb | 644 | 0 | 0 | | | 5 KB | e143c2d3e5f9115ff4e9a5806c1ea8cd4f50745e21529effa1d36f729b33baa3 |
| lib/bio/compat/references.rb | 644 | 0 | 0 | | | 3.59 KB | 2c9b0a6ae3aac34d26693af51bdfaf847df0d4813d6d8984f9c11de8151fe744 |
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| lib/bio/io/ncbisoap.rb | 644 | 0 | 0 | | | 3.87 KB | e95b248f5cb52e2cb4517d03961c439e4211dd77dbc6bf921dfd512e70d12978 |
| lib/bio/io/dbget.rb | 644 | 0 | 0 | | | 5.19 KB | e9f4133b481f5e2e4ed1f528522f145b9249d6fafc5b40a7c8e43e813cb5cc8c |
| lib/bio/io/registry.rb | 644 | 0 | 0 | | | 7.38 KB | 9548f9c05e41bc653b1c149f484a174dae94346cc02fa1564deb9215a576f9a0 |
| lib/bio/io/pubmed.rb | 644 | 0 | 0 | | | 8.36 KB | 812deee9adc88de1d59351422a2a46c08c857f7bde2fd94097f0b8de824fb8ca |
| lib/bio/io/flatfile/autodetection.rb | 644 | 0 | 0 | | | 15.9 KB | 17ae37458edc066c98932d4640a85d19d23e7fb981ca4beec93c533dca071adb |
| lib/bio/io/flatfile/bdb.rb | 644 | 0 | 0 | | | 5.55 KB | a0151a2360d3e2a0604e37b78830c26c9da2f84a29d89015476e35a525a7d26e |
| lib/bio/io/flatfile/indexer.rb | 644 | 0 | 0 | | | 26.8 KB | 07b629888b34645ac50a2b011dcb61506c655648b79580040cead344291bce5b |
| lib/bio/io/flatfile/index.rb | 644 | 0 | 0 | | | 33.5 KB | d73e284969629cadd7d745abae567d92ffe60df0e76c2dccf1aa498314546b23 |
| lib/bio/io/flatfile/buffer.rb | 644 | 0 | 0 | | | 5.84 KB | 3f9dc74600896dafff3dbb9b4594a5dc23592d4f89b27d548cf475e272dea56b |
| lib/bio/io/flatfile/splitter.rb | 644 | 0 | 0 | | | 8.24 KB | 16cdfff3260ceea21e3993cb0983e4b9dfeeca0aa75cae5a4b91684b41f6baba |
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| lib/bio/io/ensembl.rb | 644 | 0 | 0 | | | 5.69 KB | 44668eb1edef70d1df9aaac87d582b155986f00507261b236984132e8383846d |
| lib/bio/io/ncbirest.rb | 644 | 0 | 0 | | | 22.2 KB | 7dc85228baefa783a1cd6f795931cee0c043264a6897ca3bb5a180be088cafb3 |
| lib/bio/io/sql.rb | 644 | 0 | 0 | | | 6.88 KB | 6c1a8c345d51ea92bb2ad3fe8be36410ee6c062e282895ea82e64f23208610e4 |
| lib/bio/io/soapwsdl.rb | 644 | 0 | 0 | | | 2.3 KB | a986284bdf999c960ba417a7ce244c8d8cfcd22faa60b1ca333c03fb0dca2550 |
| lib/bio/io/ddbjxml.rb | 644 | 0 | 0 | | | 15.3 KB | b5d2dea12289e16bacf6e0e0cea38df066b589a918d118b4c16e6f6d3ed67a19 |
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| lib/bio/io/fetch.rb | 644 | 0 | 0 | | | 6.52 KB | 1c940010dc593ae8d4e899dea631476724463498db97194f4b720ec67ae9acf0 |
| lib/bio/io/hinv.rb | 644 | 0 | 0 | | | 11.5 KB | b9026fbbb91e2001566a67a7de559da99d19d1fdffdcee161019332abced8f77 |
| lib/bio/io/keggapi.rb | 644 | 0 | 0 | | | 22.7 KB | 651743866da05482bc048638055ad0bda007a1620f8838b7f4602108d8e3cf8c |
| lib/bio/io/biosql/reference.rb | 644 | 0 | 0 | | | 219 Bytes | 40032f7577d841583cb4becc8d1a4724d65d26f59aa33b68ec7b175675f6f179 |
| lib/bio/io/biosql/seqfeature.rb | 644 | 0 | 0 | | | 1.57 KB | cd06d5cb7aa0fbb0e146533ae9f00cde7bca91cc2e8ef1207b72da9064acfaa3 |
| lib/bio/io/biosql/taxon_name.rb | 644 | 0 | 0 | | | 209 Bytes | 35b49967c7837c9e9d2825df684a6a3cae0088c2bb813258b293c84bb583d0af |
| lib/bio/io/biosql/bioentry_path.rb | 644 | 0 | 0 | | | 355 Bytes | 081011633050343674a260c0cc924cef243a938ff338e9ea2e634c9643683fcd |
| lib/bio/io/biosql/term_synonym.rb | 644 | 0 | 0 | | | 214 Bytes | 4006d418bdc43832d646edaef19311b8ffeb9e16a76da5889e890f2ae6ff1817 |
| lib/bio/io/biosql/bioentry_qualifier_value.rb | 644 | 0 | 0 | | | 333 Bytes | a31bbfa6a9ed7886404217195c67fe08e6e6cd43b50d4cdcbcab42cdc75c93d6 |
| lib/bio/io/biosql/seqfeature_dbxref.rb | 644 | 0 | 0 | | | 364 Bytes | cfb3e564a7f131400cbd1a09c24aeb715081fadd76b3b4ad2497355eca9ff69c |
| lib/bio/io/biosql/bioentry.rb | 644 | 0 | 0 | | | 1.6 KB | 85c857e2fc1d36e5902213cc90014525f8ce894a69bda3041f0de77278728918 |
| lib/bio/io/biosql/dbxref_qualifier_value.rb | 644 | 0 | 0 | | | 339 Bytes | 9e70c862e92e5af921eb2a54ee5417a7d4f1f02c65790c22fb0d750993ef40b4 |
| lib/bio/io/biosql/location.rb | 644 | 0 | 0 | | | 899 Bytes | 72ca2e0af5b129b04594499ef013af97f2ff10ced748a1addeb358355574bc2d |
| lib/bio/io/biosql/taxon.rb | 644 | 0 | 0 | | | 499 Bytes | 7fd42529e76cd91104929880d0cdf646e102b6f17da9d606ec9a1146408fe575 |
| lib/bio/io/biosql/location_qualifier_value.rb | 644 | 0 | 0 | | | 301 Bytes | 91a4836ee8ad61da7ab1bceddbbe1b65c97c8c975bd7658258c3ac3852621cb0 |
| lib/bio/io/biosql/config/database.yml | 644 | 0 | 0 | | | 374 Bytes | 6c6b7c27d022443e57950ee4a0fff09e2386fdc4d00fb9bbfabf380c0ab33aa7 |
| lib/bio/io/biosql/bioentry_reference.rb | 644 | 0 | 0 | | | 259 Bytes | ba4e27713f75dc17fae47d14a0457f8ec4817c436298ffc8badf1d3489bbea16 |
| lib/bio/io/biosql/bioentry_dbxref.rb | 644 | 0 | 0 | | | 272 Bytes | 09baf97521a0418875c972a3f35546d2590887a844f1c184cbfdce9b26558213 |
| lib/bio/io/biosql/term_dbxref.rb | 644 | 0 | 0 | | | 286 Bytes | 20d79e66ff50404d40aafc05f34db9bf7e5dedd1c5907ce7172983c58f4fbe9f |
| lib/bio/io/biosql/seqfeature_relationship.rb | 644 | 0 | 0 | | | 353 Bytes | c859ab7b66140922717411326a2eaa4dcba7e10e251b13b7b70e4b54f50bd434 |
| lib/bio/io/biosql/ontology.rb | 644 | 0 | 0 | | | 268 Bytes | a330c60cec8b933a5c401a2c424756128714595bc2c1358440fd8ac004aba355 |
| lib/bio/io/biosql/seqfeature_qualifier_value.rb | 644 | 0 | 0 | | | 640 Bytes | 068b57382eda332143e7c608d9fe95a01aaf331d55fa0407c860d84f7f2ed7ec |
| lib/bio/io/biosql/bioentry_relationship.rb | 644 | 0 | 0 | | | 326 Bytes | 67a39f3b5dd66b2c0ed21a505dc6909351808080d9690d90bdf8be2ac1138083 |
| lib/bio/io/biosql/term_path.rb | 644 | 0 | 0 | | | 370 Bytes | 74e771545c7a709bb54a81562e3cf58a8a53487d9f180f1d6251c3a6630ec052 |
| lib/bio/io/biosql/seqfeature_path.rb | 644 | 0 | 0 | | | 482 Bytes | c36c03a85e4a8c42b88525abda4cb8d6cfbb8262ddd5276a9bd3b569521a2bff |
| lib/bio/io/biosql/term_relationship.rb | 644 | 0 | 0 | | | 466 Bytes | 3a63cc2b9a3286b8f734d36ab3199f9acad499c96ec133dc1e55212267860464 |
| lib/bio/io/biosql/comment.rb | 644 | 0 | 0 | | | 144 Bytes | 191c9f152d7695ef302da9c8e2869196ab68e563253e0b48006459bf5a5dfec1 |
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| lib/bio/io/biosql/term_relationship_term.rb | 644 | 0 | 0 | | | 315 Bytes | c4486137b0f1013f16550112bd2a6cfd18144e6e9e3c2d5fd73be9c1e62b0ec4 |
| lib/bio/io/biosql/biodatabase.rb | 644 | 0 | 0 | | | 1.93 KB | f7677fe59f0a1815cbae3f5d96c47a6d822edfb246bad73a97970c430d8612a6 |
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| lib/bio/io/higet.rb | 644 | 0 | 0 | | | 1.3 KB | 8d6daf64f8d2f1395102a877163cb75af7f1a35f2415ca702047e83c3bdc14aa |
| lib/bio/io/ebisoap.rb | 644 | 0 | 0 | | | 2.95 KB | fb8eacdbc9778a088eab23bcd721946bc46c8780ade929f1927765cb4a59393e |
| lib/bio/io/fastacmd.rb | 644 | 0 | 0 | | | 4.1 KB | fbbc315bd926712bf1e78e5acbb31beac08f4550fe05277a6bece94db822e2c8 |
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| lib/bio/appl/psort/report.rb | 644 | 0 | 0 | | | 15.8 KB | 90c03dceefd4699ff2973a0b33ce82f8fb01218626ed6a5ebd3a810de98f0ca3 |
| lib/bio/appl/pts1.rb | 644 | 0 | 0 | | | 6.31 KB | 19c41b716aafbbe1adc647713837332fe70234b157a310c323d2b513b44a8d45 |
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| lib/bio/appl/paml/codeml.rb | 644 | 0 | 0 | | | 8.08 KB | 2963e78e496f52758c67a34e65b8377dbea10ab31141a7560cc9fa782a23d6c2 |
| lib/bio/appl/paml/common_report.rb | 644 | 0 | 0 | | | 844 Bytes | a6bf1e607f9d94f754900c1e5d14d1a42dbaf70b9f123ef8f37cefd5bcef7163 |
| lib/bio/appl/paml/yn00.rb | 644 | 0 | 0 | | | 2.79 KB | 17fc612d7db16c1035adc7979da1d611a667210fb0a6bc94f50e7b6b600649cb |
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| lib/bio/appl/paml/common.rb | 644 | 0 | 0 | | | 11.1 KB | 6ab2be5c82923922eb79afe7ba71c40e5be8032b732ec9b5d282b9599a123372 |
| lib/bio/appl/paml/codeml/report.rb | 644 | 0 | 0 | | | 1.75 KB | 6c71c6032bbdbb748ed3a5523fd4236888347e2c043b633ff71b66bf9390e483 |
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| lib/bio/db/kegg/keggtab.rb | 644 | 0 | 0 | | | 8.86 KB | 8746e7d99d099528bb6c32cd2b15f075d7b51a6c6f1afc515e72a29886d7555e |
| lib/bio/db/kegg/brite.rb | 644 | 0 | 0 | | | 639 Bytes | 88a3057e5f31e1faead4b282b0a6ff1a1806f388cde96869602eccd834ce6e9b |
| lib/bio/db/embl/swissprot.rb | 644 | 0 | 0 | | | 1014 Bytes | a48b17fc793812516ddf692232b14e62e0f87bd8a9dfe3a5631eda69a5848ae3 |
| lib/bio/db/embl/embl_to_biosequence.rb | 644 | 0 | 0 | | | 1.7 KB | 68591ecd39e1f856e9c55abd8b471514f64db35b8e14ef39eb3a1470c1e91096 |
| lib/bio/db/embl/common.rb | 644 | 0 | 0 | | | 9.55 KB | 64897ad1d95a525b5d6cc5a07f8ec848c1ae789318ff91b1e0a2ad9f9d8f9a9a |
| lib/bio/db/embl/sptr.rb | 644 | 0 | 0 | | | 34.8 KB | 45b92e71ce83d9d5913eb1211f3351fef1d1b9b4364ccaa8e64f78a1509b8126 |
| lib/bio/db/embl/format_embl.rb | 644 | 0 | 0 | | | 5.76 KB | 6d5899a54364eac80e657aad9bc4d4d7bb64c2695e2ea028a1030226ed1c58fb |
| lib/bio/db/embl/uniprot.rb | 644 | 0 | 0 | | | 951 Bytes | af4e716ecf160c6d3b1e48b8bdba8e449f388d0babc972a77f76d5294bea7d9a |
| lib/bio/db/embl/embl.rb | 644 | 0 | 0 | | | 10.9 KB | 6b0cdbc22803d05b809c088a2acace5b08fe7756c9003139e46447608b936821 |
| lib/bio/db/embl/trembl.rb | 644 | 0 | 0 | | | 1010 Bytes | 75b1c109bfff4503e62e67c940d16231d736ec49e604dcffa43c009444f19477 |
| lib/bio/db/prosite.rb | 644 | 0 | 0 | | | 12.5 KB | 61eced5116b7110becf2f3434e606faee605d60052031dbc397b0b95e312fbb4 |
| lib/bio/db/nbrf.rb | 644 | 0 | 0 | | | 5.2 KB | 662f0b5ac3817bdaee7822faa93d325fc268dddfebcc821a2c240fc1a68b9f17 |
| lib/bio/db/url.rb | 644 | 0 | 0 | | | 1.3 KB | fa3cc7f2302ed52979ff991c196021ff31d7cec3acaa629d84e61f7347e91370 |
| lib/bio/db/go.rb | 644 | 0 | 0 | | | 11.2 KB | a8a487004c4dc254481e2af7fdbc342b6c88bcb23202d9f18821e84c2e8c3718 |
| lib/bio/db/fasta/fasta_to_biosequence.rb | 644 | 0 | 0 | | | 1.51 KB | be1fbf4bc481f11772ca1961afb6187ee7a40073254fefad0010a42d88a6d731 |
| lib/bio/db/fasta/format_fasta.rb | 644 | 0 | 0 | | | 2.91 KB | 6159abb9e804c087998e215df6cd4ff96d1e72a8bf37ae20a92f6a232645e632 |
| lib/bio/db/fasta/defline.rb | 644 | 0 | 0 | | | 16.2 KB | 2b181c20f6ca49acec286fc92388ad607139e4f65e92158760e3cc3163075a2c |
| lib/bio/db/medline.rb | 644 | 0 | 0 | | | 7.3 KB | 7f3f23fe3ef044baf9612bdb92d70e5248d7f49e694e65851492fa3781451717 |
| lib/bio/db/fasta.rb | 644 | 0 | 0 | | | 10.5 KB | 9a7825c7299dd18725f8bb01ed2697fc24300b9b67d552c9b1ddad6e67c9a8b0 |
| lib/bio/db/rebase.rb | 644 | 0 | 0 | | | 13.7 KB | 114394ea44e7b3ae9996d130bb4ee0c0d5544a43b8f7ce69fe5c18635ba24473 |
| lib/bio/db/aaindex.rb | 644 | 0 | 0 | | | 7.57 KB | ad6802a8be202fdb2479cd585af31a2e67c8cf30cad7f9c51d69a1128effa736 |
| lib/bio/db/litdb.rb | 644 | 0 | 0 | | | 1.82 KB | 0029e9cf3e579f47af3a1cfa97e5abe7137f35b1d8aa8404c02533c3dd00b458 |
| lib/bio/db/newick.rb | 644 | 0 | 0 | | | 19.1 KB | 7396214491bf02891e0a4b3b29700a7a69de03c8f61c5424a75f6fd0cc8f079c |
| lib/bio/db/gff.rb | 644 | 0 | 0 | | | 59.8 KB | e58ba51fef363f8f938c648622c34a1f13de43898b234fc84362057baf2c48dd |
| lib/bio/db/biosql/sequence.rb | 644 | 0 | 0 | | | 18.4 KB | 724dbeb203a9f60027f95be552e8467c94863afe7e7fd818eed04660e7caedce |
| lib/bio/db/biosql/biosql_to_biosequence.rb | 644 | 0 | 0 | | | 1.42 KB | da74d050ae2210a830144b38bc30584d07da783d1a45ab5dad30b533ee94986a |
| lib/bio/db/pdb.rb | 644 | 0 | 0 | | | 594 Bytes | 75fb017faf8c188ceb846336c581b5455cffe63c4cc6ff6d3e26e264a1d3325c |
| lib/bio/db/transfac.rb | 644 | 0 | 0 | | | 5.89 KB | 9517ff987b3420e897fdc690f233ceb3cd9734257ecb33a2b4ebd9fb2d3a1008 |
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| lib/bio/db/genbank/ddbj.rb | 644 | 0 | 0 | | | 423 Bytes | 1e206a3f3f93eab293fd6533debae45d4c7575dfe1edda71f81f76846abcd036 |
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| lib/bio/db/genbank/common.rb | 644 | 0 | 0 | | | 7.4 KB | 25b76d6c0adc83e30429d986323f80596c9b170c29f8dad000eeb3d1728e2288 |
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| lib/bio/db/genbank/format_genbank.rb | 644 | 0 | 0 | | | 5.35 KB | acd8c06f5d672b14c7c948507b5f61e5c79c52408e3c22e46b2ab7c724e11e61 |
| lib/bio/db/lasergene.rb | 644 | 0 | 0 | | | 8.87 KB | 6be38b378abd5dd0a73211a9a18125dd6b91588acf85d9b62dc9fe4f0ce5a0eb |
| lib/bio/alignment.rb | 644 | 0 | 0 | | | 73.5 KB | d85b3b451b67e3e8f3068da46d38bb608b6c4f67cf9c9e6963e88cb828e3cbda |
| test/functional/bio/test_command.rb | 644 | 0 | 0 | | | 7.92 KB | 6faccbc96403ae9d46cfc93f2bebdbc705e1d2caa097b6b510be746bab87a80d |
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| test/functional/bio/io/test_ensembl.rb | 644 | 0 | 0 | | | 6.71 KB | 812a7a2e9bc4a399453e21146e3da42e28e1b05aedb38f7006f3ca9e3bb299f2 |
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| test/unit/bio/test_alignment.rb | 644 | 0 | 0 | | | 34 KB | ee1923262554bcf22310add450ed783298851adc3cd67476e72cb1f475a3dde8 |
| test/unit/bio/util/test_restriction_enzyme.rb | 644 | 0 | 0 | | | 1.09 KB | 173b05cc5d5a9ca62314e18931b51bf17967d896f345a39c81ae7521ac8fd340 |
| test/unit/bio/util/test_color_scheme.rb | 644 | 0 | 0 | | | 953 Bytes | 23afdc54f75cc0709343a6bcfd985da975f6b3b71286d87ee8d9b8a54bd95e77 |
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| test/unit/bio/db/kegg/test_genes.rb | 644 | 0 | 0 | | | 1.08 KB | d54b0dcfafea74a46e6fc6076aeb53c8b05f08ff11abbe1e2a68ea5f48d1941c |
| test/unit/bio/db/embl/test_embl_rel89.rb | 644 | 0 | 0 | | | 5.07 KB | f56148a9ab70316bafd118e87025951f6d66ca749c23b2facd4cb3a9c035be39 |
| test/unit/bio/db/embl/test_embl.rb | 644 | 0 | 0 | | | 4.87 KB | 1ac2154df203e4788006eddba576445bcef41aff535e82040939a03774bf6efb |
| test/unit/bio/db/embl/test_uniprot.rb | 644 | 0 | 0 | | | 844 Bytes | 150f6e59ed38b31198b4ba453e9af887ff22feaf57984eb32f62d82c741169b4 |
| test/unit/bio/db/embl/test_sptr.rb | 644 | 0 | 0 | | | 80.1 KB | 52845fe706d00458720e407cfaea399490b1a158c27fd866124655117c773eab |
| test/unit/bio/db/embl/test_common.rb | 644 | 0 | 0 | | | 2.37 KB | ecbb5c95c6dafcc7491bda3fbc07f797bfdc130103b108686517326ed5d9b8de |
| test/unit/bio/db/embl/test_embl_to_bioseq.rb | 644 | 0 | 0 | | | 6.15 KB | 993c0ebb44c893088e20f754a5ab4052d67bde3083d61ff51250320da7f50a05 |
| test/unit/bio/db/test_soft.rb | 644 | 0 | 0 | | | 6.66 KB | b6bc93ea726026432fc0b909fefa7b488eca736cd703cc8a7ddc9ac9ab720c6f |
| test/unit/bio/db/test_fasta.rb | 644 | 0 | 0 | | | 8.47 KB | 6377df17d2105774bc5e817fdd66c84cb7e8a9f8f0499d9b9475e181a3f7534e |
| test/unit/bio/db/test_medline.rb | 644 | 0 | 0 | | | 4.32 KB | cd42129c011e1655690bc87843555937928e9160c117b3d839196ee0724ca0f8 |
| test/unit/bio/db/test_newick.rb | 644 | 0 | 0 | | | 9.45 KB | 7932930eda6bcc2c486eb923e36d265d6df2b0443cdb94f8fddb4456e424d3ae |
| test/unit/bio/db/test_aaindex.rb | 644 | 0 | 0 | | | 6.05 KB | 8798d4d41b60393aa3e42329b84a1618a84d36df213c50bec2121389ed9b8377 |
| test/unit/bio/db/test_gff.rb | 644 | 0 | 0 | | | 41.4 KB | b99411e0ea3a9856a45977377fe487e2166121228f9bef723467a3d42415d446 |
| test/unit/bio/db/test_nexus.rb | 644 | 0 | 0 | | | 15.8 KB | 165c1f90608248d71055dd56105ab50bcd2daca002d6b5b14af159ce50b60da0 |
| test/unit/bio/db/test_rebase.rb | 644 | 0 | 0 | | | 2.48 KB | 133e2276b79c1b047da8040b1d586ec368fa276255488d9c0fe846a18f5f5cc5 |
| test/unit/bio/db/test_url.rb | 644 | 0 | 0 | | | 1.01 KB | c4d34a6884d49689cc03df4a35c297372f94d0c1a038fb56ea648607c18210fa |
| test/unit/bio/db/test_lasergene.rb | 644 | 0 | 0 | | | 8.35 KB | 6e66af40738d72e98689c6dfbba10437b5e2a905f4df486a9a7ddf8c32db3c6c |
| test/unit/bio/test_map.rb | 644 | 0 | 0 | | | 8.03 KB | d9c6dba20a0f6add021416f0a73acdd8ea7740fe6512679aa6cc77f4ace1b2d3 |
| test/data/aaindex/PRAM900102 | 644 | 0 | 0 | | | 1.08 KB | 62991a1bd9b197111da30dd3bd8f2a637c435778aef8d2bbb548c5e0fa8ea69d |
| test/data/aaindex/DAYM780301 | 644 | 0 | 0 | | | 2.04 KB | 20b2940e4d45f6b2710ca0295998804233dd8407f607a8803dd428fdf82a55da |
| test/data/refseq/nm_126355.entret | 644 | 0 | 0 | | | 3.4 KB | 60a6bdd9418cc8b9bfc96a1017f412db4f6baddfb3bd9a33c17297bbfc89aee7 |
| test/data/paml/codeml/control_file.txt | 644 | 0 | 0 | | | 409 Bytes | 1dea05cfccc9947e7730d1997d3a4ddb7be6c18792b4d09e6b56460420567366 |
| test/data/paml/codeml/rates | 644 | 0 | 0 | | | 7.41 KB | 613b284a3821ed6c1cc2f6f03db46b509cb045ac45763fe66e1ca7c0b15af081 |
| test/data/paml/codeml/output.txt | 644 | 0 | 0 | | | 5.47 KB | aa4dfcbc3cbbf663558c2129d338285ca1d541a29ad0104c55765b552bfdb3f5 |
| test/data/command/echoarg2.bat | 644 | 0 | 0 | | | 8 Bytes | e4647efd47d7ad4edca4f3725a4f9610157cbc8fd9023666c3183400120b2358 |
| test/data/embl/AB090716.embl.rel89 | 644 | 0 | 0 | | | 2.49 KB | ac5f6d55a30fc5f050f0d8ab1f50fb206707385e7b8434daf02dd7ed623f55a0 |
| test/data/embl/AB090716.embl | 644 | 0 | 0 | | | 2.47 KB | 0cf0a12b44f6472a021abcf4dc38f2f8a64d6dd4049463056057968e2ce0f0f4 |
| test/data/TMHMM/sample.report | 644 | 0 | 0 | | | 909 Bytes | 9f86ea10faa13634881100b73613287672f62c509903768c33ac1d4d4cda4b4c |
| test/data/fasta/example1.txt | 644 | 0 | 0 | | | 4.66 KB | 7b441d36bd74e2bb8662c58aee4fd9003efe79a59eb0449558f4855d839c3bf8 |
| test/data/fasta/example2.txt | 644 | 0 | 0 | | | 1.35 KB | 228e65bbb2986163fae76f27c57f046d0b3bc3f76cabd0f9f8dc65e6ad31460a |
| test/data/uniprot/p53_human.uniprot | 644 | 0 | 0 | | | 71 KB | cf6237bed4c283ab5a40c330c6554d49a1ab52f48069cfd90f3082edfde2ea98 |
| test/data/HMMER/hmmpfam.out | 644 | 0 | 0 | | | 3.13 KB | e832f4b86eebeb3d956ca1ecef073986f108f22553916975a061b49d61c55c02 |
| test/data/HMMER/hmmsearch.out | 644 | 0 | 0 | | | 3.67 KB | 575ce8e79d16903c9cf7670748e88bad399066ef5b9bb35f93cb36298d76b8f9 |
| test/data/prosite/prosite.dat | 644 | 0 | 0 | | | 167 KB | cffe5a81263ac7e3877bab8f7d32e27ea722411b4d4f0fca235fe4e552fae671 |
| test/data/SOSUI/sample.report | 644 | 0 | 0 | | | 414 Bytes | 1925c1a9a14b535fcdbc76c4e57ac1195a9f830c63345423ee426def973aa333 |
| test/data/rpsblast/misc.rpsblast | 644 | 0 | 0 | | | 7.26 KB | 9e44883a6a78e25db6da697431f3d64a6844cc4fd05d39e2bc2eca7b4cf428c4 |
| test/data/blast/blastp-multi.m7 | 644 | 0 | 0 | | | 11 KB | c99e14d4bcb868f03515051dd8c0c32da98f580e22b9212425b6c775d6b8fa06 |
| test/data/blast/b0002.faa.m7 | 644 | 0 | 0 | | | 5.52 KB | bb7d1c37f92f8a36527c02efb6f6352294eb1acf688ea6caedb7b934f9817e8f |
| test/data/blast/b0002.faa.m8 | 644 | 0 | 0 | | | 56 Bytes | 6c329cdca78f16508223e98bcbe25cb26e96d8e24180439e1ca913034fd261e6 |
| test/data/blast/b0002.faa.m0 | 644 | 0 | 0 | | | 5.15 KB | 2479b6f0b728c354edbf01fe600cd7884308e1e6a22913a7420e23af75cbfd75 |
| test/data/blast/2.2.15.blastp.m7 | 644 | 0 | 0 | | | 67.2 KB | 723f8d684b11de6b01630896e6e96b37d95dc80344bf550128bf27b59200cb8b |
| test/data/blast/b0002.faa | 644 | 0 | 0 | | | 1.02 KB | bfd37a1019479f9388ea3c0151097176337d608993f0d0d1b6e0c69ef7850c3b |
| test/data/bl2seq/cd8a_cd8b_blastp.bl2seq | 644 | 0 | 0 | | | 1.54 KB | bacf6a696044c0751edd37d72025326ac19417e39f76139e1ac568d54c098e2f |
| test/data/bl2seq/cd8a_p53_e-5blastp.bl2seq | 644 | 0 | 0 | | | 984 Bytes | 7f6e883493ac3be2114dfe4794e4a324bb67e7e9064c211bed60a6527c783b33 |
| test/data/soft/GDS100_partial.soft | 755 | 0 | 0 | | | 4.41 KB | 1bfefad740153929f2e57e33eb45487558e52da5e577f6a1c690c06f7af5ed0b |
| test/data/soft/GSE3457_family_partial.soft | 755 | 0 | 0 | | | 45.5 KB | dbb03aadc6b6db0a5a80b05b6b09ace4725fbdbd2862c6925d0a7c72b68aaef3 |
| test/data/iprscan/merged.raw | 644 | 0 | 0 | | | 7.47 KB | 5eeed06ce72f5e9a2b6c1b8cd95daf17c8df82b1e926056dfc089a141a1177f1 |
| test/data/iprscan/merged.txt | 644 | 0 | 0 | | | 5.17 KB | b8920e4a017e8c9d0bdd837bf6691c8ed13fe3dfad8f5992b97cdb1f4db62b8c |
| test/data/genscan/sample.report | 644 | 0 | 0 | | | 2.7 KB | f13ec60b9b006881654cb13344f92618f94d669cfa2fde890be41f37f3f38ad8 |
