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Size: 951 Bytes

Versions: 23

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Stored size: 951 Bytes

Contents

#
# = bio/db/embl/uniprot.rb - UniProt database class
# 
# Copyright::  Copyright (C) 2005 Toshiaki Katayama <k@bioruby.org>
# License::    The Ruby License
#
#  $Id: uniprot.rb,v 1.5 2007/04/05 23:35:40 trevor Exp $
#

require 'bio/db/embl/sptr'

module Bio

# == Description
# 
# Parser class for SwissProt database entry.# See also Bio::SPTR class.
# This class holds name space for UniProtKB/SwissProt specific methods.
#
# UniProtKB/SwissProt specific methods are defined in this class. 
# Shared methods for UniProtKB/SwissProt and TrEMBL classes are 
# defined in Bio::SPTR class.
#
# == Examples
#
#   str = File.read("p53_human.swiss")
#   obj = Bio::UniProt.new(str)
#   obj.entry_id #=> "P53_HUMAN"
#
# == Referencees
#
# * UniProt
#   http://uniprot.org/
#
# * The UniProtKB/SwissProt/TrEMBL User Manual
#   http://www.expasy.org/sprot/userman.html
#
class UniProt < SPTR
  # Nothing to do (UniProt format is abstracted in SPTR)
end

end

Version data entries

23 entries across 23 versions & 5 rubygems

Version Path
bioruby-bio-1.2.9.9001 lib/bio/db/embl/uniprot.rb
bioruby-bio-1.2.9.9501 lib/bio/db/embl/uniprot.rb
bioruby-bio-1.3.0.5000 lib/bio/db/embl/uniprot.rb
bioruby-bio-1.3.0.9901 lib/bio/db/embl/uniprot.rb
bioruby-bio-1.3.0 lib/bio/db/embl/uniprot.rb
bioruby-bio-1.3.1.5000 lib/bio/db/embl/uniprot.rb
jandot-bio-1.2.1 lib/bio/db/embl/uniprot.rb
ngoto-bio-1.2.9.9001 lib/bio/db/embl/uniprot.rb
ngoto-bio-1.2.9.9501 lib/bio/db/embl/uniprot.rb
ngoto-bio-1.3.0.5000 lib/bio/db/embl/uniprot.rb
ngoto-bio-1.3.0 lib/bio/db/embl/uniprot.rb
ngoto-bio-1.3.1.5000 lib/bio/db/embl/uniprot.rb
wwood-bioruby-1.2.11 lib/bio/db/embl/uniprot.rb
bio-1.4.3.0001 lib/bio/db/embl/uniprot.rb
bio-1.4.3 lib/bio/db/embl/uniprot.rb
bio-1.4.2 lib/bio/db/embl/uniprot.rb
bio-1.4.1 lib/bio/db/embl/uniprot.rb
bio-1.4.0 lib/bio/db/embl/uniprot.rb
bio-1.3.1 lib/bio/db/embl/uniprot.rb
bio-1.1.0 lib/bio/db/embl/uniprot.rb