Sha256: 75b1c109bfff4503e62e67c940d16231d736ec49e604dcffa43c009444f19477

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Size: 1010 Bytes

Versions: 23

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Stored size: 1010 Bytes

Contents

#
# = bio/db/embl/trembl.rb - TrEMBL database class
# 
# Copyright::  Copyright (C) 2001, 2002 Toshiaki Katayama <k@bioruby.org>
# License::    The Ruby License
#
# $Id: trembl.rb,v 1.7 2007/04/05 23:35:40 trevor Exp $
#

require 'bio/db/embl/sptr'

module Bio

# == Description
#
# Parser class for TrEMBL database entry. See also Bio::SPTR class.
# This class holds name space for TrEMBL specific methods.
#
# UniProtKB/SwissProt specific methods are defined in this class. 
# Shared methods for UniProtKB/SwissProt and TrEMBL classes are 
# defined in Bio::SPTR class.
#
# == Examples
#
#   str = File.read("Q2UNG2_ASPOR.trembl")
#   obj = Bio::TrEMBL.new(str)
#   obj.entry_id #=> "Q2UNG2_ASPOR"
#
# == Referencees
#
# * TrEMBL Computer-annotated supplement to Swiss-Prot	
#   http://au.expasy.org/sprot/
#
# * TrEMBL Computer-annotated supplement to Swiss-Prot User Manual
#   http://au.expasy.org/sprot/userman.html
# 
class TrEMBL < SPTR
  # Nothing to do (TrEMBL format is abstracted in SPTR)
end

end

Version data entries

23 entries across 23 versions & 5 rubygems

Version Path
bioruby-bio-1.2.9.9001 lib/bio/db/embl/trembl.rb
bioruby-bio-1.2.9.9501 lib/bio/db/embl/trembl.rb
bioruby-bio-1.3.0.5000 lib/bio/db/embl/trembl.rb
bioruby-bio-1.3.0.9901 lib/bio/db/embl/trembl.rb
bioruby-bio-1.3.0 lib/bio/db/embl/trembl.rb
bioruby-bio-1.3.1.5000 lib/bio/db/embl/trembl.rb
jandot-bio-1.2.1 lib/bio/db/embl/trembl.rb
ngoto-bio-1.2.9.9001 lib/bio/db/embl/trembl.rb
ngoto-bio-1.2.9.9501 lib/bio/db/embl/trembl.rb
ngoto-bio-1.3.0.5000 lib/bio/db/embl/trembl.rb
ngoto-bio-1.3.0 lib/bio/db/embl/trembl.rb
ngoto-bio-1.3.1.5000 lib/bio/db/embl/trembl.rb
wwood-bioruby-1.2.11 lib/bio/db/embl/trembl.rb
bio-1.4.3.0001 lib/bio/db/embl/trembl.rb
bio-1.4.3 lib/bio/db/embl/trembl.rb
bio-1.4.2 lib/bio/db/embl/trembl.rb
bio-1.4.1 lib/bio/db/embl/trembl.rb
bio-1.4.0 lib/bio/db/embl/trembl.rb
bio-1.3.1 lib/bio/db/embl/trembl.rb
bio-1.2.0 lib/bio/db/embl/trembl.rb