mspire-0.8.0

https://rubygems.org

id: 37342

number: 0.8.0

platform: ruby

spec_sha256: e7787b3353ec8fc9dcd0ded14cb275e2dbd0c7bdaf0e75c70f59028ef55a05a8

sha256: b5cc742d75c15feb7eca383b9d42ddb5ca11c239a24fa36ba09a964ca4d20c47

created_at: 2024-05-13 08:14:16 UTC

updated_at: 2024-05-29 23:45:09 UTC

position: 24

version_data_entries_count: 179

uploaded_at: 2012-07-21 06:37:17 UTC

indexed: true

has_extensions:

extensions:

Gem size: 449 KB

Version Data Entries

Total: 179

Unpacked size: 1.44 MB

Full Name	Mode	Size	SHA
LICENSE	664	2.52 KB	71065bf6d40f3e71898398ec2a65cb107fee35c083166dac99532d117def8dd8
VERSION	664	5 Bytes	dd95472b8c0a81c48adabbe42d451bc1343dade7d15ad83263df0f77a66b20ff
lib/mspire/commandline.rb	664	845 Bytes	ed76f197db1badacae704dc8ccf3d47d83b74176828e9c4ebd5f18af5fd51c5d
lib/mspire/ident/peptide.rb	664	2.08 KB	b611bbfa45daf5badf255cd2f3a2d6a306fc251e67f408fa209c73e602c81380
lib/mspire/ident/peptide/db.rb	664	7.95 KB	c8407621b1ab3c758cbb6d490b6a0222447f8b6247f86c6b709c4656b12c0dd1
lib/mspire/mzml/scan_list.rb	664	1.11 KB	3238302e60a908f4560a76a97d16f6e721f38fe2585b0498b1f2b5ab7f46405e
lib/mspire/mzml/source_file.rb	664	1.57 KB	e3e8b7f99526a429dce22c1f2db8180b5db57e3fd4a40c974df21c87065301a5
lib/mspire/mzml/spectrum.rb	664	6.82 KB	e875076d07d66ca5999030d672387b0aff0563ee19ef84ecffd67acbe40481f5
lib/mspire/spectrum.rb	664	303 Bytes	51600d1fcb5a90e4f4a733e0aa5b0c6ec85d9fa45f969819d70ea42b39b489d8
lib/mspire/spectrum/centroid.rb	664	522 Bytes	fe245cc854270d359a20eabb5c896fabf16ad89a1fc2224bc819f16534647cdd
script/download_uniprotkb_db.rb	775	4.36 KB	64dd34617378f426d831bb90c7b1f5961015c235270b1add14076361a8689124
script/mzml_read_binary.rb	775	709 Bytes	4728c53ff637589547f4c05a917277f0762af0c8e1e1d0b45264da1ec55bbe1e
spec/mspire/isotope/aa_spec.rb	664	541 Bytes	28fd5f79a5b3ab8653bd6585b1f55382f6100f0fbe8fe8ed735e2745407f1639
spec/mspire/mzml/plms1_spec.rb	664	1.61 KB	a3787e8bc6ff870281a3fe2681a6cc7b8f792a1c100a90472698a0d08ae3f093
spec/mspire/mzml/source_file_spec.rb	664	651 Bytes	a20c3dde99f6a34cdd3f79e1d8b9ffdf0c1d84ce3f49830a2e4f06a1d0d7c0cf
spec/testfiles/mspire/quant/pdcd5_final.killedextratabs.tsv	664	7.44 KB	16f0438e4ba2f37fc04064037569a308a0e6fab8c07deeea0ebd7b7854058841
README.rdoc	664	553 Bytes	7449e1eff4b2342f0c8643e6974737f19461de4fb1e55f27f42d7466cb52823c
Rakefile	664	2.06 KB	10231d40d0a8fff79c496919b1f3f39d7ea1e39f028b71304d6b627cbb0e8875
bin/mspire	664	81 Bytes	36abff58a575477308a0a6cd2ca951a3e39d14e98d446e45ffed0593256d49ad
lib/core_ext/array/in_groups.rb	664	769 Bytes	26cec67e2cf45aa8a13c4fa68f157119fe46f2e1a2ea1f9750378488fd078251
lib/core_ext/enumerable.rb	664	212 Bytes	953800aa71de32c9b36b6443ea8eec5c9f8422ead8849fc8ed190f03bf78d5e9
lib/cv.rb	664	35 Bytes	57dd77ec11f5a0855bc02aa6edd9dc1707de313d9838f9f3abf58789365c1e2b
lib/cv/param.rb	664	1.41 KB	6f4da27aa29c941f3facdfdb50c275580f420d4a7eb37b768b3e7397f908b314
lib/cv/referenceable_param_group_ref.rb	664	204 Bytes	22c3e784d87e5a0170ef2ad344efc40826f56cc70f62fbd9f273cb9b2e9387ef
lib/io/bookmark.rb	664	345 Bytes	a1248a3a5dc2c1a45bb41a2acb90a7f9e32321f64834b5f214f4ac59acc08bb8
lib/merge.rb	664	178 Bytes	f390b683b5b2e1a533bc65ffc044a0878059d6e12eddf3995c30de34af8fffde
lib/mspire.rb	664	183 Bytes	52a5a668b9d4ebc4949ff7e4af3acf45884cca71aa2c672c456f1164d263a20d
lib/mspire/bin.rb	664	1.92 KB	37dd6d2945c5c2da51fd09c8ed347124d28c62693e1298dcadbc6e39220abfe8
lib/mspire/cv/obo.rb	664	405 Bytes	b9b607a38eac4b3a1e855b595760ece4b537ba8c472f1102445c5065fdb6b86e
lib/mspire/cv/param.rb	664	1.12 KB	f279b0cc6232e282cb1a0921d2c5d200a3da849448e45236634ddb024a5c6759
lib/mspire/cv/paramable.rb	664	5.35 KB	469cad0fc2802053176c97370c1d16a8dc9f624b98bd5d295ae40dd34497368f
lib/mspire/digester.rb	664	8.93 KB	a54508b930cb29992ef57c783b97a20e7832b95ba88ed7fc2cc94f7352d6de9c
lib/mspire/error_rate/decoy.rb	664	1.22 KB	13447d61003da5747bee58c6e2f9d45215d0943e1540b8c636ad21517d71f1b2
lib/mspire/error_rate/qvalue.rb	664	3.14 KB	7689582d4d3a369eaa9a9c8d6e51a89cb6ae922091f8c6fb5f97812920c16c06
lib/mspire/fasta.rb	664	2.53 KB	f7e64a8d0d8582371e6061ef47cda2ce3169b8a64e7c3f36d3969b47167dac47
lib/mspire/ident.rb	664	1.11 KB	f6ef3385fd8c9ecd12047a3767f1d07014d4e2d3e9b893e4785c144adff6ee2f
lib/mspire/ident/peptide_hit.rb	664	522 Bytes	d53a6ab5489b38d3054d5f527248584d99f5aa8e1d0308fca3c4113f85e98ace
lib/mspire/ident/peptide_hit/qvalue.rb	664	1.75 KB	237df1ab8e9d9db92115aa4e5dcda728ae2216083ab568e2dd2ac611c5f34741
lib/mspire/ident/pepxml.rb	664	3.91 KB	356c0809a82796ae585fc508a4852a7d564c6e9d44b50d2b709d6783f2a33179
lib/mspire/ident/pepxml/msms_pipeline_analysis.rb	664	2.2 KB	c1228083d8356be57a1385a85607aaa3a06f771e021c9c9d8fad3fdc3fb46518
lib/mspire/ident/pepxml/msms_run_summary.rb	664	2.65 KB	4453eca1cb77557474c5dceb6a6f83e87a493467bcdb2f55d2cb3344dd58b135
lib/mspire/ident/pepxml/parameters.rb	664	243 Bytes	6a27a2e524a3a0411f44e2636c51b85e608956cdf733c7a0d6db5941704a1fde
lib/mspire/ident/pepxml/sample_enzyme.rb	664	4.62 KB	5ebf24f126ac326e701ebc6795b62f3c9022af977705fe107e32f1d8f6b353e4
lib/mspire/ident/pepxml/search_database.rb	664	1.28 KB	de9b2f2ac61b03881b596e6b199c3c1d08350da9036ad4c3073050a4b1aad1c1
lib/mspire/ident/pepxml/search_hit.rb	664	4.3 KB	e74a0e75e0a3b404cc8a31c8249320210042d0799e0d5f424e66ee2d35c8fec2
lib/mspire/ident/pepxml/search_hit/modification_info.rb	664	2.48 KB	0bdf7a4e39f180cb2e3337ad71cfbb8e1272608da4921911d86de6c3c02805be
lib/mspire/ident/pepxml/search_result.rb	664	862 Bytes	cae5ee1165d5c8ef91cf2f1bee397767beae50cb4022a6e68f58295ef125077d
lib/mspire/ident/pepxml/search_summary.rb	664	2.79 KB	b87e2cb917073ccd74424cd1fbd0efdbe701294d0d5fbde06e15d29244d34c1f
lib/mspire/ident/pepxml/spectrum_query.rb	664	2.35 KB	0a0322342b3281a7d360f0c27a942c08cfd385abba6db4e7c2c5c8709ae5ed1a
lib/mspire/ident/protein.rb	664	695 Bytes	9c0112a7a8a6d71e00525d3fe2596c41a06939eb633c07a5cd07c1e3bfa077ea
lib/mspire/ident/protein_group.rb	664	3.59 KB	45eddf0c92a115814f42312d4b4ddb351e5c983f1d845f0b7d25fdae42724864
lib/mspire/ident/search.rb	664	3.37 KB	77ffd5653d5cd377c971e595ce94be73485dbe7588c45eb10830176356f9b6f8
lib/mspire/imzml/writer.rb	664	17 KB	287a0770cde391e041f9a81fcacbe913723b4891c0d0ea467df4b6692bd22156
lib/mspire/imzml/writer/commandline.rb	664	4.68 KB	3d9bf6d554709f1b2ca5b564be9abf440601dbdcecd2f84f0c703ea5f4b91bf5
lib/mspire/isotope.rb	664	3.07 KB	8e513b564a113bde3ea35dfcf716ee958a2294f8e5455703838a82fd7ac270ca
lib/mspire/isotope/aa.rb	664	2.39 KB	aeec78e60e251cd171fa95e00623c8d2db10d9ed07c1dd0d939ed9062dfdf5e0
lib/mspire/isotope/distribution.rb	664	4.03 KB	8eea47d140e55725f51f1db325f3c7a0ad3c9b012a289c10e1670e6faa7c2381
lib/mspire/isotope/nist_isotope_info.yml	664	19.7 KB	7eb6891b514be28a583be2c1f9d105d16733fd99ee363fb2ea358c54ec898069
lib/mspire/mascot.rb	664	63 Bytes	cedeec1ef237db177a411ff3fbfa72c9d7ecf71aabe31a92e4147b24738c0a10
lib/mspire/mass.rb	664	1.61 KB	38064dd6fc3ac40a81910256d3b8a01ea1a7b7ba57535d7d309df52310c418cc
lib/mspire/mass/aa.rb	664	2.26 KB	a1ce8997879f87b4db5ae19e0c9e21de495c7516a91e91ac61a85879eec34d6a
lib/mspire/molecular_formula.rb	664	3.89 KB	0a3c1dbb74d3a11f54e0f058a88f70d313785dbe4a9a17be2cadb823fc1618e2
lib/mspire/mzml.rb	664	8.53 KB	72672502c1d6c13f2a2cb5f28cad41b0a5200b61ed218f0f4e6885d6b21d66b4
lib/mspire/mzml/activation.rb	664	1.27 KB	60f051189968f7b93fc15ec37e5f517015452b348e01406c8a84fc4703da3f56
lib/mspire/mzml/chromatogram.rb	664	1.77 KB	f077b265bc86a40c0192011b09073eb1ef1c9a4664525ff9f9df7618ae63121a
lib/mspire/mzml/chromatogram_list.rb	664	132 Bytes	4cdf255c64e442783a6ea8ab1f43886ea737836466dd973e4b263d7e0fe8d987
lib/mspire/mzml/component.rb	664	921 Bytes	2a2143ca8e1507457aba2ae28dfadeff5b1a87f328456c436e3cce3945bad57a
lib/mspire/mzml/contact.rb	664	392 Bytes	3538ec03307606ba70592a1bc545d03a2152b8f2c02247c82e5b0d643e8e2f7d
lib/mspire/mzml/cv.rb	664	1.96 KB	987265e58769b1fb47470166fd6f1912aaa0be715b16c87faf300d9231251792
lib/mspire/mzml/data_array.rb	664	5.39 KB	b3888bbcf4aa1dbc90947b45359310ecfffa43d635514bc46cd197fba9224939
lib/mspire/mzml/data_array_container_like.rb	664	1.42 KB	996c094f3a3d78d68bd99eac5bb1c8ae5f642dcccc1af21a884cd82ecc01b718
lib/mspire/mzml/data_processing.rb	664	1.08 KB	1e8432ae726bdc3bdd27de65e6e1a89ef262c056539f095b1f06040437e2018b
lib/mspire/mzml/index.rb	664	1.37 KB	6662687129248176a39e92106e2a7e2ac3b45d582794036c52db8f01fb172ccd
lib/mspire/mzml/index_list.rb	664	3.55 KB	36d6cc4cbce64f63927c0c246fbc9162ec9f65d8600ce3083a65eae6372840b9
lib/mspire/mzml/instrument_configuration.rb	664	1.5 KB	256a21cab5457e3fd18a987ecc74bf577de0b0a8b47b975b30874adae948cfc0
lib/mspire/mzml/io_index.rb	664	1.86 KB	249b9c8e5f80b86b1e76d7a598bd75545e3dc60a5b9c6064968dbc84034eae6e
lib/mspire/mzml/io_indexable_list.rb	664	2.33 KB	db454d3a6a7d861650655fe298fa45f99757cd0647de187c5372e7d5561dc1e6
lib/mspire/mzml/isolation_window.rb	664	695 Bytes	3e7a42d9e9e78dc17ff56c0d260215ea8fa195fc04ad31543909db695a7732dc
lib/mspire/mzml/list.rb	664	673 Bytes	97af68a666935660db0843677844cf45c64a8727d9806fbc12a581a4161724a9
lib/mspire/mzml/parser.rb	664	186 Bytes	f6e4dcc92ac72152a044ec927f1abd4814ea1eb0899d3d2d95e6e8bdad315229
lib/mspire/mzml/plms1.rb	664	675 Bytes	7c8d51c845e49355205d6fab56c33df513e2455b60c319920e2ac33fa2d01b10
lib/mspire/mzml/processing_method.rb	664	1.7 KB	d92f6502a872e50cefd334cbc40fd53a3f71ae3cf98bd96e58934a572af1741a
lib/mspire/mzml/product.rb	664	814 Bytes	04c25417c4651327b95ef6f19349badec11bff61594d6912aee7574e8d81f9df
lib/mspire/mzml/reader.rb	664	4.6 KB	604363a5479b99b33e3f211fe77f06c9390c2c26adc852f0b224ca0797ec9a8a
lib/mspire/mzml/referenceable_param_group.rb	664	1.13 KB	7780bd36690c0f07f640ce084fefdd6d23e5af2cb01bdb28f52b9b4b843b62db
lib/mspire/mzml/run.rb	664	3.38 KB	74a68806387fe7ad6fd102d91e3ee8e24b4b14f45b5f65acf424ea37f20efefd
lib/mspire/mzml/sample.rb	664	855 Bytes	cdc94517fb4f923a6c9556eb896b4703878dd8ec5c57afc303c270ee98b16084
lib/mspire/mzml/scan.rb	664	2.21 KB	56f2392b3aa565d10bf75419b56ad6ee5bbb3cb6d3df0ef7f993ff020d85c6a7
lib/mspire/mzml/scan_settings.rb	664	466 Bytes	2950671c030f9adfb1e83dce2314f2af03eedd0b8d705142a833e28e4210f777
lib/mspire/mzml/scan_window.rb	664	328 Bytes	5a42853df8c3eeb7c6d09c2addbdcf2a42091bfed7d80f140ae407c9a5619df9
lib/mspire/mzml/selected_ion.rb	664	468 Bytes	cd7bb49a174ab69f9b7899c258cfb0f93dd2bba50034ee222f68de072024ce9a
lib/mspire/mzml/software.rb	664	708 Bytes	d271c152aca991e149b54998ed850f695e0243a7a9a0d9077db85c82b9df0996
lib/mspire/mzml/spectrum_list.rb	664	257 Bytes	a904542e6f16302b90c2507a1ec59363f89340a7f609cf53930b4830799e0bad
lib/mspire/obo.rb	664	795 Bytes	9bfe48538c57c99317ace0d623cd3b02ef0fd8a5810c73518d595289df2ef687
lib/mspire/peak.rb	664	424 Bytes	70db8be16218eea24be0c169e08f5e663d436e147d7637e430aa52232c765bfa
lib/mspire/peaklist.rb	664	12.7 KB	8686a147ef45d78dfeb9ad488ddbd8549a85e60a6303adb9fdfff4384534ee4f
lib/mspire/plms1.rb	664	4.69 KB	932cf90d6cb576382a4854972ae1af8508372abe160fdc7ddcfef091faf4157c
lib/mspire/quant/qspec.rb	664	3.62 KB	bfa79e9e3bb9e4cfef750e20f8b499005026e098dccc5e44beca679e8f039bc3
lib/mspire/quant/qspec/protein_group_comparison.rb	664	564 Bytes	c91bd8d79b799736ac0cdb9541ff3098eea0aa4e0e62c8127a59daebc5e22327
lib/mspire/spectrum_like.rb	664	4.18 KB	67aa812153bf0c59b602f59dfb153bdd8902d79151051b4253213a74c1e2bd33
lib/mspire/tagged_peak.rb	664	967 Bytes	6c280c2f6d0d4a928eb8fc67bc60ccdc351e35ad218922e9f0b061035d0f4f34
lib/mspire/user_param.rb	664	753 Bytes	8828531f6a1e62b78d07f20bb01657d2f2751678b54bce69746af8f9f9632757
lib/obo/ims.rb	664	98 Bytes	bb7c7cc0170014201f88ac7a7c1379e5007c2333cd350e747a9529bb7c773f80
lib/obo/ms.rb	664	98 Bytes	63d4e7fb810eba6678f01a38d531960bee24c0e3a4976379df79b5ec4659ae09
lib/obo/ontology.rb	664	1.66 KB	00446c4b8d15058e01743ba2d7d105b210c8d7ad41d70c814ca954101156fe69
lib/obo/unit.rb	664	100 Bytes	74764c9077c98c6ccdc75501005c987122ca66d467dbae61491d43a12d5b392f
lib/openany.rb	664	435 Bytes	53cd807b8aa300ee99ee6dc7b09d59f465049e7c929f0c4e9ad56b3e26024738
lib/write_file_or_string.rb	664	366 Bytes	a3a789f787939427c48d98a4fceb6e44e0c2e6e8c10742324202f7e823b1d6b5
obo/ims.obo	664	19.8 KB	a1b5ab2ac96e1a38419a7dadd60b671bf65abf801ef0425f337277f6ae169dd4
obo/ms.obo	664	415 KB	b4cdce4f78123978e1e2e5f20cda9431ee9de2b1bfc1227dc5a7203761588d4e
obo/unit.obo	664	87.1 KB	7bbc81fa1099935a452ef8e2ff2da1b5b3334ee7dd0f97baa9409cceeccc98f3
script/quant_compare_direct_injections.rb	775	2.88 KB	b76e23697b2bab99f7ff0e94aa32b4005f986eb889d347b0554cbf0ced74fb21
spec/cv/param_spec.rb	664	557 Bytes	5fd1bea6bd219c6ee6280ee397aeab9f28bf7577c28e75cf447d04492d9635d6
spec/mspire/bin_spec.rb	664	2.31 KB	bb1703201dd73b6b7c3a978c32de80fb6c890f9326ad9280fe2fed8f417ccd80
spec/mspire/cv/obo_spec.rb	664	408 Bytes	4ab9d5e836215cb64ebfec21493dda234d6f801360e069b5b1aefc344ef7ca5f
spec/mspire/cv/param_spec.rb	664	1.03 KB	50fe5cc740ff1fd471ab05e37ca30d67410f2eeb310e75ba7709229c6aba055c
spec/mspire/cv/paramable_spec.rb	664	1.55 KB	95f3b56cf5798114171492481a6869da3180789b51b1a95697e0bc1776a56b89
spec/mspire/digester_spec.rb	664	8.96 KB	195bdfe6b715b2d27a4525a190cebf2460b881c5ae0b88c11850f11c57bfdc63
spec/mspire/error_rate/qvalue_spec.rb	664	1.42 KB	8407bba714e4d1eb9b131a59f992798c0f47f42ef66b8730c287006cff3eb633
spec/mspire/fasta_spec.rb	664	3.19 KB	f1fe2b244d0992d100d24c323461afa2b80132d4f762f7dead5d6fca98c7d7ec
spec/mspire/ident/peptide/db_spec.rb	664	3.34 KB	34110b699a560e9a5f291d3d8d632b3010b062a26935c5d38cf3da51e63517f5
spec/mspire/ident/pepxml/sample_enzyme_spec.rb	664	4.64 KB	142b00b032a85ea2097bd39fc456aa86584a63497314c4816fe80540597c8292
spec/mspire/ident/pepxml/search_hit/modification_info_spec.rb	664	1.15 KB	d3d48313888f698f9d4dfee3b00956cea3051781bf4dba0367e908a93ec1d0eb
spec/mspire/ident/pepxml_spec.rb	664	19.7 KB	a684e1bcf92afd7d1e288dcb92b0a8892c4eec9d3e39784035eb5492e32a051b
spec/mspire/imzml/writer_spec.rb	664	5.31 KB	328164d385a7a9e469b9ca04a81e71a76abbc47724a978cc3e2a8930e0baeb9a
spec/mspire/isotope/distribution_spec.rb	664	2.53 KB	e7403663ca0663b9447816128160284314bae21a0b384c96f6bd86487433dd1d
spec/mspire/isotope_spec.rb	664	1.52 KB	21f68cfbafac45b01d2a22b2eae39a789f5c06bd11fe71ceb5ff1455a42ac4f9
spec/mspire/mass_spec.rb	664	1.17 KB	c6fb9a7691421a8991bb972301079107436c630b17e694b8a2b280afdd8f4791
spec/mspire/molecular_formula_spec.rb	664	3.42 KB	3d37b032666e776875653625285ee3c35c150aefd1636877e5cabc39b759718a
spec/mspire/mzml/file_content_spec.rb	664	617 Bytes	e4f7d2573fdc80a6477364d91cbd645deeaa1530dec61b0ba3166d265ec58d3f
spec/mspire/mzml/index_list_spec.rb	664	3.44 KB	a0a58c971d0a554f404b6c113fc378e5c4c7273288e4e3bb54e436c990af52aa
spec/mspire/mzml/referenceable_param_group_spec.rb	664	1.14 KB	adc94355e71d916837a4bc607258c67d434ac02bfe0202eadf0043a72c3faf85
spec/mspire/mzml/spectrum_list_spec.rb	664	1.21 KB	582e8693fe7ee5f43ae7f11fb8005f69adb4c909fdc8c65aaa548840d206c697
spec/mspire/mzml_spec.rb	664	12.8 KB	1a2fdf20d755310cb45eb7eb26796239212faa9320579a4b0962d0bd009f0c74
spec/mspire/peaklist_spec.rb	664	10.6 KB	11f91fc14d39bafd522f04508de505761496cec1e9dbf4345cbf1bc37d5074d8
spec/mspire/plms1_spec.rb	664	1.11 KB	b4551d449b5cc061b0824c44eac90038d4e2f56a049c53b5d0e79a6ab2380038
spec/mspire/quant/qspec_spec.rb	664	568 Bytes	c156a83805b3d747a7871d0ec4dd99070950f23fba6af4c11a07e86e03ad3788
spec/mspire/spectrum_spec.rb	664	1.23 KB	eb192aa47f99704f3c0fd47d4987013563c28d68d3a9204cfa1ebcc54b0babd4
spec/mspire/user_param_spec.rb	664	1.45 KB	f2eeb0c90684c740033cc212ff7f9c1f5417e9ee1947d38ba2dbd6f5abcdfefc
spec/obo_spec.rb	664	1.21 KB	723a3d646cfa625cdd2b2714d28c5cfe9007a3a5bbc41e003b89f5d0e755a5c9
spec/spec_helper.rb	664	747 Bytes	409334e2b8e8096b553283b891851da60d06d1dd6e45598a69d059d0a6f907c8
spec/testfiles/continuous_binary.tmp.ibd	664	64 Bytes	d193a2a55bd7efcdf4ed8c85da71c2a095b3eee7b96fd187626ec6a0179fde00
spec/testfiles/mspire/ident/peptide/db/uni_11_sp_tr.msd_clvg2.min_aaseq4.yml	664	35.6 KB	a056a0caf974be54def3ca8bf6cc2b058f7eb10dd85714eb6de02d762665df7d
spec/testfiles/mspire/imzml/continuous_binary_check.ibd	664	64 Bytes	d193a2a55bd7efcdf4ed8c85da71c2a095b3eee7b96fd187626ec6a0179fde00
spec/testfiles/mspire/imzml/processed_binary_check.ibd	664	88 Bytes	4f4209824c234f3f568e842b27b39479f950bae411197cf5fb432f3b0c844442
spec/testfiles/mspire/mzml/1_BB7_SIM_478.5.mzML	664	8.32 KB	842fea561bc8694866c67dda2358cd3673e9884dd5c909ec041308f8bbd41af5
spec/testfiles/mspire/mzml/j24z.idx_comp.3.mzML	664	236 KB	76a05df022a23516f9084c9c4e2cb5da54cc2a41963b7a9a36b541aab1b8899f
spec/testfiles/mspire/mzml/mspire_simulated.MSn.check.mzML	664	4.63 KB	e14cac42b41bea757205564cb01ba17cf2ea2135ce948f0cadcce8a4a3206f96
spec/testfiles/mspire/mzml/openms.noidx_nocomp.12.mzML	664	24.2 KB	e568940ff9648624cf62953570364a1da112be6582e3ef6f927f971bd3017106
spec/testfiles/mspire/quant/kill_extra_tabs.rb	775	283 Bytes	e146b55865565c72f88000ab674bc2c7eb62eb6a7f4799d5a799da358b3243af
spec/testfiles/mspire/quant/max_quant_output.provenance.txt	664	389 Bytes	b77e4f42468f37715669a2e77edcfd4e163676c150eb30d0936d71fe00d90068
spec/testfiles/mspire/quant/max_quant_output.txt	664	78.8 KB	d818a52e38e4ac86d74156aa306fc35e86f6a4da0514b64c3493703b9e804521
spec/testfiles/mspire/quant/pdcd5_final.killedextratabs.tsv_qspecgp	664	21.3 KB	54303835aa6fd3bd12310ae02a8e26836cf25071724d33eae4d69e847324cf10
spec/testfiles/mspire/quant/pdcd5_final.killedextratabs.tsv_qspecgp.csv	664	21.3 KB	54303835aa6fd3bd12310ae02a8e26836cf25071724d33eae4d69e847324cf10
spec/testfiles/mspire/quant/pdcd5_final.txt	664	10.5 KB	3246b0bc51768e4c9734539e3d23e47efe6927cdebe7bd03bcae5750932f226d
spec/testfiles/mspire/quant/pdcd5_final.txt_qspecgp	664	0 Bytes	e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855
spec/testfiles/mspire/quant/pdcd5_lfq_qspec.CSV.csv	664	21.8 KB	38d9bbf8d0ac3611634ec4d0b55faa86273f2e7b1147f7c906bca86c2528c8be
spec/testfiles/mspire/quant/pdcd5_lfq_qspec.csv	664	21.4 KB	d2bd11ff61d593a0cc5727034533ecee065d795fbe814454447226fae518e420
spec/testfiles/mspire/quant/pdcd5_lfq_qspec.oneprot.csv	664	12.7 KB	d28c0c67c7192cbb515ede5c016b8f44865b942d161771ed1306c2a19e841232
spec/testfiles/mspire/quant/pdcd5_lfq_qspec.oneprot.tsv	664	12.7 KB	8243ca6b66821c755a0febfb1ca0c91c7ee660f3d312fd2369bf6490e4fa7cc8
spec/testfiles/mspire/quant/pdcd5_lfq_qspec.oneprot.tsv_qspecgp	664	13.2 KB	9c4ff27e0e6d069ef50ecdfeceb7793ecd630ddab5e623338ac23daad4a28b8b
spec/testfiles/mspire/quant/pdcd5_lfq_qspec.oneprot.tsv_qspecgp.csv	664	13.2 KB	9c4ff27e0e6d069ef50ecdfeceb7793ecd630ddab5e623338ac23daad4a28b8b
spec/testfiles/mspire/quant/pdcd5_lfq_qspec.txt	664	24.5 KB	fbcb78badd6291d860adac5949ba0d7b272d6ea99b367d22a479aa77e658d07e
spec/testfiles/mspire/quant/pdcd5_lfq_tabdel.txt	664	9.82 KB	9b601eddb50c3bc53d8ff8d4bd8bd10fb2ac14fede6f743f8a0ceb49fcab41f0
spec/testfiles/mspire/quant/pdcd5_lfq_tabdel.txt_qspecgp	664	8.41 KB	8f4a0d5f7b770424204a722c6d0902c4bd44c6ba94752b01f69784df8a597cbc
spec/testfiles/mspire/quant/remove_rest_of_proteins.rb	664	263 Bytes	4c50467655d8ba2c9fd6430773a5bd9289f39294d40f80541cc22e26455696de
spec/testfiles/mspire/quant/unlog_transform.rb	664	228 Bytes	5a39e57c6d9f6e52c3ed2f35ee99e6621a3851e4b28d5f033b00c39bc5a3b098
spec/testfiles/plms1/output.key	664	148 Bytes	292b7a52fbd48cee4cea63090a2fba82036c41dee11a0c475fb5b09cd90739e3
spec/testfiles/processed_binary.tmp.ibd	664	88 Bytes	4f4209824c234f3f568e842b27b39479f950bae411197cf5fb432f3b0c844442
lib/mspire/ident/pepxml/modifications.rb	664	2.9 KB	21d6915376398d08418e4bbe90a51927e7c2b4ecf0acea997146192a80adf857
lib/mspire/mzml/file_content.rb	664	604 Bytes	9afa6fbda1ece53a510a967b9adbb899729b9f8384640fbaaa0edd8507138fa9
lib/mspire/mzml/file_description.rb	664	2.03 KB	4d1c9c34bb2231b07e35c90d4f15e86fce8b8431190ed0bdf4ac9e307c4fad5f
lib/mspire/mzml/precursor.rb	664	2.58 KB	645ee1d0b1ac5a0ff89e6e199f3f13b1bda2645d3347cfdc36d85ff48c0d9d99
spec/mspire/ident/protein_group_spec.rb	664	2.67 KB	129cb17d321bb1f12439570082820d63e0761b33f0d7cdf82e5618d9a7036dfa
spec/mspire/mzml/cv_spec.rb	664	442 Bytes	987a8ebb0525881ab944344acdf9bfecbbb982aa17a497cba3bec9f4f98c4e9f
spec/mspire/mzml/data_array_spec.rb	664	2.97 KB	0fdd07d84228c40ad021c3a294a428278c38ea47106bc0bf35dcf8a01301c6dd
spec/mspire/mzml/spectrum_spec.rb	664	1.34 KB	b985413d7d318e30814eb79a3ea27c3f63e960796778a59e6ca2fdc2e4de28c1
spec/mspire_spec.rb	664	201 Bytes	0ad271676bf5b830103482e6977a0f41e441fa6e00a401eeb8c7afc6f3bddea5
spec/testfiles/mspire/ident/peptide/db/uni_11_sp_tr.fasta	664	3.92 KB	a4cc630326ac544575a011b1e87556f0fe6fe5a9c40aeaef2340e63ac0a8e530