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Contents
require 'mspire/cv/paramable'
module Mspire
class Mzml
# MAY supply a *child* term of MS:1000630 (data processing parameter) one or more times
# e.g.: MS:1000629 (low intensity threshold)
# e.g.: MS:1000631 (high intensity threshold)
# e.g.: MS:1000747 (completion time)
# e.g.: MS:1000787 (inclusive low intensity threshold)
# e.g.: MS:1000788 (inclusive high intensity threshold)
#
# MUST supply a *child* term of MS:1000452 (data transformation) one or more times
# e.g.: MS:1000033 (deisotoping)
# e.g.: MS:1000034 (charge deconvolution)
# e.g.: MS:1000544 (Conversion to mzML)
# e.g.: MS:1000545 (Conversion to mzXML)
# e.g.: MS:1000546 (Conversion to mzData)
# e.g.: MS:1000593 (baseline reduction)
# e.g.: MS:1000594 (low intensity data point removal)
# e.g.: MS:1000741 (Conversion to dta)
# e.g.: MS:1000745 (retention time alignment)
# e.g.: MS:1000746 (high intensity data point removal)
class ProcessingMethod
include Mspire::CV::Paramable
attr_accessor :software
def initialize(software)
@software = software
params_init
if block_given?
yield self
end
end
def to_xml(builder, order)
builder.processingMethod(order: order, softwareRef: software.id) do |pm_n|
super(pm_n) # params
end
builder
end
end
end
end
# The order attribute is *not* intrinsic to the ProcessingMethod (and thus
# cannot be queried from within the object. It can be determined easily
# by asking for the index of the method in the array of processing
# methods. (zero based indexing is fine)
Version data entries
13 entries across 13 versions & 1 rubygems