Sha256: 7c8d51c845e49355205d6fab56c33df513e2455b60c319920e2ac33fa2d01b10
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Size: 675 Bytes
Versions: 25
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Stored size: 675 Bytes
Contents
require 'mspire/plms1'
module Mspire
class Mzml
# will use scan numbers if use_scan_nums is true (typically start with
# one), otherwise it will use index numbers (starts with zero)
def to_plms1(use_scan_nums=true)
spectrum_index = self.index_list[:spectrum]
scan_nums = spectrum_index.create_scan_to_index.keys if use_scan_nums
nums = [] ; rts = [] ; spectra = []
self.each_with_index do |spec, index|
next unless spec.ms_level == 1
nums << (use_scan_nums ? scan_nums[index] : index)
spectra << spec
rts << spec.retention_time
end
Mspire::Plms1.new(nums, rts, spectra)
end
end
end
Version data entries
25 entries across 25 versions & 1 rubygems