mspire-0.1.7

https://rubygems.org

id: 37297

number: 0.1.7

platform: ruby

spec_sha256: 20cd1dc7f6e91910b7db729d1aadb326a9b184896db24143ae487207fa7e02f3

sha256: 73fd3824b8ef8d517069da0f57a0e8347b53e964bd267555f2d0a0eaf3642889

created_at: 2024-05-13 08:14:16 UTC

updated_at: 2024-05-29 23:44:30 UTC

position: 69

version_data_entries_count: 80

uploaded_at: 2009-07-25 18:06:19 UTC

indexed: true

has_extensions:

extensions:

Gem size: 112 KB

Version Data Entries

Total: 80

Unpacked size: 364 KB

Full Name	Mode	Size	SHA
lib/sample_enzyme.rb	644	2.45 KB	e502aa9be7ac521f5c12cb6438d50157300ecb84748d3213ad4ad5b37091fd22
lib/spec/scan.rb	644	1.47 KB	008bfebf755197bcb73b565fa65eccf7536b46779db6681464c30205277a8fd8
bin/fasta_cat.rb	644	831 Bytes	a7f6d511de9ac4e7a3a11b91419648fd8114d834857e26f85d422276bb51e035
test/tc_align.rb	644	2.35 KB	910c0a6743082ace1336b831e4f1a7291e6e4c555c0fbfd9b181003578814ff6
test/tc_roc.rb	644	4.5 KB	896768ca71cf8ac06e089015cbda9ae12fa7e542aa375f85dfd4f69aa8880f11
lib/fasta.rb	644	10.5 KB	37db9fdf06cb9f73effde27be0e6295a2a08950898ca660422a49ed594d15860
lib/roc.rb	644	3.41 KB	2fe0d10aa983d80e80b252e552993b3d3f51bd3a0497ee87a6e62f80198a6614
lib/spec_id.rb	644	17.4 KB	c1568c58ee1532337245b527501c15b05d00a5cf66ae29c4351d10f430ffa79f
lib/gi.rb	644	2.9 KB	fe54afa9da020e02093d33ff7e2312ffd0b78ef6ae3e642e721faf6c8a9533ba
lib/align.rb	644	5.37 KB	6d5e64bbaad6d9cb254c4bc970b64251aa39f1efcf08756214901412bb000c38
lib/spec_id/srf.rb	644	14.2 KB	53c8644ba6573eb4ecc46fb50ed1305153e31b608474caf3225b689a8743d5bb
lib/spec_id/bioworks.rb	644	15.1 KB	f35024f284a61b21dd3be09334c7906df27291f334472e0f499f6991093d13bc
lib/spec_id/proph.rb	644	13.1 KB	7bd96bcfd8eb1ec1a59712bad4ef104042acf6bc3f8f86c8ad8fcb6c9e10be2f
lib/spec_id/precision.rb	644	11.7 KB	88bc64e8d71d3fb03c770f606222ce2804d6a036eb8ec6a16490ee5d729c2e32
lib/spec_id/aa_freqs.rb	644	4.74 KB	37032021d6c60937ab0f5e938eba8e2109d8519b49631c6d78906e81b083dd60
lib/align/chams.rb	644	1.99 KB	363a05334b2723071c2610623b22b40daeac190e4910261f2c17718f11806c2d
lib/spec/msrun.rb	644	3.86 KB	194a4fe54c2c1ea85f53db6b748598615c31f93c420edfef8d8524f94b47c47d
lib/spec/mzxml.rb	644	1.02 KB	b32d37bb5831512ee018bd5178add4de081194ba233e52293083bc160be8873e
lib/spec/mzdata.rb	644	1.19 KB	de93469653dea7fbedc1df2d9890c932f134720bfce9a7c7468bcf16f4316752
lib/spec/mzdata/parser.rb	644	2.38 KB	61cac0ebe5a5de6eca87f511ea31e4d712ec5c091a96de684275b8ad17b7b1b7
INSTALL	644	1.22 KB	d97d269ebd021194df36fbcc9d83e1e00c30b7c5280cdc9db13bf2fe4b5136ff
README	644	1.16 KB	748dbd99350bc676ff0ec6cd3c7cf5eea2f92bf4ed910a376143e50f2f7100e2
Rakefile	644	5.09 KB	67f24e045dc73abe79a7583e2383a3b9a567cf86bc0a76da28ec8834be9b2a36
LICENSE	644	1.74 KB	49ec5bb405e973c72366fcfb3ab81f4afc5fe4f0c4664420840528d79f545666
release_notes.txt	644	382 Bytes	d16597979c941b525d1b13196aaabc37a391c5bd07956727dc9d8068a392a1d1
bin/fasta_cat_mod.rb	644	1.68 KB	d4420373062b3b75d128df1645ebecc1f8480a73c60afbc2cbd8790979cc51ae
bin/fasta_mod.rb	644	1.31 KB	202d05ad97169c5f0e5c2540f3a486ae15e60be524c436a0884ebc60c23a6093
bin/gi2annot.rb	644	216 Bytes	9d3ec4d3a35ebb9ec4c113ac83becb2c5e11d488954fb2cace467b74e1d65164
bin/raw2mzXML.rb	644	505 Bytes	d2c0cad45e9eab6ecf80cdf48174d55af34efa0a2f7383f78321e1db95fc3b53
bin/bioworks2sequestXML_gui.rb	644	1.94 KB	21e17a36deb6a22e42af72420c01bc58a23f3eb62967641e77eaba723758c4de
bin/bioworks2excel.rb	644	258 Bytes	3af72cf0ffadab4ccaffb8224058e6a4e76f705eea3c9e531e2487b5fc621fd5
bin/bioworks_to_pepxml.rb	644	4.38 KB	7a9bdac121db9c08538c8f527838b59d2778e34c9b4b255c871a429c089431b5
bin/mzxml_to_lmat.rb	644	1.49 KB	e182e4d27b0ee7a06e407bb01c555d2bd033a89581956d5d8616e6197ed0d806
bin/protxml2prots_peps.rb	644	773 Bytes	7a32b263193a3f5b8926930e25ad98d0830fa466888dd4252559530a47825cf9
bin/id_precision.rb	644	4.06 KB	283f5271300dca7563c8871f9037f0c24b8c44a1fec26359ccea521238847d6f
bin/id_class_anal.rb	644	2.92 KB	d268574c18d9e1f39152753bd57a0252fae62bd33a344a2bf6ae7a8ecd4b1273
bin/precision.rb	644	62 Bytes	bf0b3e7e658ac9fd96623e9a4c66698ac0d7b528893ecf8866ac28ff5b165ffe
bin/fasta_shaker.rb	644	3.18 KB	9c150993548a9f87e5a56b00a8595f7f23b103cc87e64d4edf0f9170a0299991
script/prep_dir.rb	644	2.72 KB	a63bd0114bca0f09bf7ec26842f330679325a0f672a3a7862f9ae1f0580a6344
script/gen_database_searching.rb	644	8.5 KB	44b94504c3cbbd00e39fbfb7af3fde0a14738502943a9d10f909df6fa75ad117
script/mzXML2timeIndex.rb	644	603 Bytes	0443ac1ae0631a6806cab3d82546db674e31be8fd43176775c1629cec5f3a8d7
script/tpp_installer.rb	644	7.75 KB	5d5a31f6277cef6816a7d9253b0e65a27529dd3b4c18734a6d3ca3baee0ea783
script/histogram_probs.rb	644	1.58 KB	6f885155b7ec7f5c6977622f433784432d1fcb7031d1c0bbc4bd122d6ba995d0
script/top_hit_per_scan.rb	644	1.79 KB	ac2f9326c5c1d300c869eaa1e6eeb6eb0e085e9f4a6f13218a6dde26ef989ba4
script/filter-peps.rb	644	3.62 KB	2ce86ae12beee7d953ef7368c0374fb5d4b1727a70e7c2715341795ecd79ea44
script/simple_protein_digestion.rb	644	752 Bytes	0c4578001b1e6f1cb0491d7a6e116f8167db8e4e81f7e01b5a8dbeeb2dd0f199
script/genuine_tps_and_probs.rb	644	3.32 KB	87a6cd09ee3ad395929c3024d14a0222ebc5495b2965ad50a83717aed05a1b4b
script/estimate_fpr_by_cysteine.rb	644	6 KB	566b5cf081369fbdbba3c306e288dc6d5600f9b74060aa638352fe50ae860a3c
script/find_cysteine_background.rb	644	3.46 KB	ca552b5f627934899cc2692d767665600bc6b88a7a8819ec1e83ec1a92ececb1
test/tc_srf.rb	644	8.3 KB	562cff0d28142806f35150f8524525df626f54337527f4815363a65da7b97fed
test/tc_proph.rb	644	3.37 KB	ed3a9af7de1841b783f1d958c15843d65743c54e612e999852b084ce19715134
test/tc_sequest.rb	644	11.7 KB	a66d2342cf34a212824a47db85c74a5e15b63d5383643631df18714166550a28
test/tc_spec.rb	644	3 KB	10da32437ab4ca4c9e555107cf9e21e13b01385925dcac317c11203f4232e1ca
test/tc_aa_freqs.rb	644	2.11 KB	08e178de516cd1391032e468e2cdc2eeea06665d7af51866763743d43184dc2c
test/tc_protein_summary.rb	644	2.97 KB	d8a3d1d2ce65ca3cebade19f97bbf7bf286131035fac90dddfeadcbe5f5c5269
test/tc_fasta.rb	644	10.1 KB	0db5a2b64e91cf618e373a2f0ea31693ed40fdc3c8bf363f3a4a4923c77d0ee8
test/tc_bioworks.rb	644	5.24 KB	809fa54dceef62ff393e2e9d0d9ab25d849f67a7905432e4916b73842e3fbba1
test/tc_peptide_parent_times.rb	644	955 Bytes	6329ec81d262587a8c088a30f6e76fdb8619567f1dbf93530c1844f37f9d04ff
test/tc_msrun.rb	644	2.82 KB	0e43de95014c90a4b080b03a65181b16bca65ad487eff47ce2bacc653b51c3ac
test/tc_spec_id.rb	644	2.34 KB	9126c7d69b17c46ecde16c32ec817e1d2b9a941241ce46570b0f85192193c4d5
test/tc_precision.rb	644	1.97 KB	7ef405aa4c018e2d6fd8767bb505123457cf339697e2b2f138043d1577ce0f19
test/tc_scan.rb	644	619 Bytes	2724a2a708996b13b37151aa6d1e33a35a6c8c2acbb6185551651dcb08c2cdcf
test/tc_mzxml_to_lmat.rb	644	1.05 KB	0016cb422def530ba9649061f0379727b79b27435cc0a11f14f09585a271665a
test/tc_bioworks_to_pepxml.rb	644	1.81 KB	c1bf3490558de965876d86b850aadf93ca6b615366f8f1ad1c2d826328939cfd
test/tc_sample_enzyme.rb	644	980 Bytes	c222651a84805915350f0428404f4fa245b72a8b1e3e912b4334cefe576a5c33
test/tc_gi.rb	644	469 Bytes	3cef1040d8784fb138554345742d12754af06dd8647492d9661957d207f8cd9f
test/tc_spec_id_xml.rb	644	764 Bytes	5e07f60f10a5b361615592c4752df67b452069d8afcaea5da4eb4b5053c3edcf
changelog.txt	644	1.25 KB	685f3b49013f820888541899695398eef42ab5a00278f962caa3e9f5e13daec4
lib/spec_id/sequest.rb	644	56.2 KB	22b4e705662586de51219ab305af884eab8cf37fef731f704bab70c937be2ea0
lib/spec/mzxml/parser.rb	644	13 KB	59b63ae00796a292a9372aa8dcedfcfa0c106a2675bbc37163b52caa1ef1d4e2
bin/protein_summary.rb	644	14.5 KB	f2134e9510f958cb63f876ce2171db44187885d1a82bd1acc3d9a8b3a18c06fc
bin/pepproph_filter.rb	644	486 Bytes	aa0081dcc5d0d3f2f4565fb09cbd483df02ee888ddbc56753764f1e20d973b26
bin/filter_spec_id.rb	644	11.6 KB	89f9402fe4f093c072c0af365c2e803588ed056d86288929e0d584329f5b102b
script/msvis.rb	644	800 Bytes	5bf259d2df075bc27077ee5cf1143dcffa10c142e11197d7768d328ca8be681f
script/create_little_pepxml.rb	644	1.17 KB	90a1c48e7e54e39f85697025f4794ee619b93aa65a76d5439fbe089f094537b4
test/tc_mzxml.rb	644	2.61 KB	70a1c30c8e7294779ff1d9fb897f759a6369b8145629a29c7f007ea77e92ecb6
test/tc_id_precision.rb	644	2.59 KB	83b987e539b83fc2ae3c14991811eb4ed32cd60a58ce0f05512a209738581b3d
test/tc_id_class_anal.rb	644	2 KB	130253e9f3626bcb5a742fa789b7b648450b12247e6382818c56be5a4705e415
test/tc_filter_peps.rb	644	1.26 KB	912bb7732f95aba423ea8bf161d9052ee31d797f55fca403d06ff6cf4e9a2771
test/tc_fasta_shaker.rb	644	3.39 KB	c1fe9f8b36f197b9586294ecad0e60163d51f39e61b322756e225f8584045aa3