Sha256: 9c004531088572c4e49f798d2b3b3d2527b217cdbe7d635eeb7af2dc3a46e2de
Contents?: true
Size: 1.18 KB
Versions: 20
Compression:
Stored size: 1.18 KB
Contents
#!/usr/bin/env ruby
#
# pmsearch.rb - generate BibTeX format reference list by PubMed keyword search
#
# Copyright (C) 2002 KATAYAMA Toshiaki <k@bioruby.org>
#
# This program is free software; you can redistribute it and/or modify
# it under the terms of the GNU General Public License as published by
# the Free Software Foundation; either version 2 of the License, or
# (at your option) any later version.
#
# This program is distributed in the hope that it will be useful,
# but WITHOUT ANY WARRANTY; without even the implied warranty of
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
# GNU General Public License for more details.
#
# You should have received a copy of the GNU General Public License
# along with this program; if not, write to the Free Software
# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
#
# $Id: pmsearch.rb,v 1.2 2002/07/23 04:52:03 k Exp $
#
require 'bio'
if ARGV[0] =~ /-f/
ARGV.shift
form = ARGV.shift
else
form = 'bibtex'
end
entries = Bio::PubMed.search(ARGV.join(' '))
entries.each do |entry|
case form
when 'medline'
puts entry
else
puts Bio::MEDLINE.new(entry).reference.send(form)
end
end
Version data entries
20 entries across 20 versions & 4 rubygems