Sha256: 1097e8b0e10bcbcc826a8040961ee72b0ec29990d8bbdf76199e5745bfa96c12

Contents?: true

Size: 740 Bytes

Versions: 6

Compression:

Stored size: 740 Bytes

Contents

=HEADER
@prefix rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> .
@prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> .
@prefix dc: <http://purl.org/dc/elements/1.1/> .
@prefix hgnc: <http://identifiers.org/hgnc.symbol/> .
@prefix doi: <http://dx.doi.org/> .
@prefix seq: <http://biobeat.org/rdf/seq#> .
@prefix db: <http://biobeat.org/rdf/db#> .
@prefix : <http://biobeat.org/rdf/dbsnp#> .

=BODY
<%
  id = Turtle::mangle_identifier(['ch'+rec.chrom,rec.pos,rec.alt.join('')].join('_')) 
%>
:<%= id %>
  :query_id    "<%= id %>";
  seq:chr      "<%= rec.chrom %>" ;
  seq:pos      <%= rec.pos %> ;
  seq:ref      "<%= rec.ref %>" ;
  seq:alt      "<%= rec.alt[0] %>" ;
  seq:dp       <%= rec.info.dp %> ;
  db:vcf       true .

=FOOTER

Version data entries

6 entries across 6 versions & 1 rubygems

Version Path
bio-vcf-0.9.5 template/vcf2rdf_header.erb
bio-vcf-0.9.4 template/vcf2rdf_header.erb
bio-vcf-0.9.2 template/vcf2rdf_header.erb
bio-vcf-0.9.0 template/vcf2rdf_header.erb
bio-vcf-0.8.2 template/vcf2rdf_header.erb
bio-vcf-0.8.1 template/vcf2rdf_header.erb