pets-0.2.3

https://rubygems.org

pets

quick gemspec

.gem

.gem metadata (gemspec)

.gemspec

id: 1283270

number: 0.2.3

platform: ruby

spec_sha256: d999c5c87b8bcd30b8fdd32f026ffdc5bd88ca2c2ba6dcc11e93d4053ab8364e

sha256: 24c59f0eccb6e5772b3e1bf3da8630911cc6ba0756b17b0a6983d6ecd3875d7d

created_at: 2024-05-13 08:33:23 UTC

updated_at: 2024-06-13 15:29:13 UTC

position: 2

version_data_entries_count: 67

uploaded_at: 2021-06-09 14:40:36 UTC

indexed: true

has_extensions:

extensions:

Gem size: 134 MB

Version Data Entries

Total: 67

Unpacked size: 282 MB

Full NameModeUIDGIDMtimeLinknameSizeSHA
bin/reg2phen.rb100755005.46 KBc374f525e303600cc5b84e59358d120e3f40898c08bc40172a9f43542ae6f448
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bin/coPatReporter.rb1007550018.4 KB5df6003d46c8baa7b75d435d500cc4f13d87f846474c40ec6361a75bcb90f7ff
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bin/merge_by_cluster.rb100755001.7 KB087c979a3e2beab9181865e6a3cc05d90321477495bb13810fe11cb9a6b02950
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bin/paco_translator.rb100755004.35 KBab8da5cd8390e89f2511f28561a3e882b9c43fdafcfe1ed71daecbe39269d223
bin/phen2reg.rb1007550012.8 KB66d0dae2b9488faab1e5515cb1238bdfb7b4e620dc02b32cbf0ca1bb2d06f7ba
bin/phen2reg_predictor_check.rb1007550010.8 KBe6a1271e61b2ffdc338073a887e1dcfce33a5ab0dd92b70a405b603881b755a6
bin/profile_cleaner.rb100755005.09 KBc4a2b91b6c7740d4015590e5fdc0ed8f9fa6bd08508cd45441f754dc7cd356ff
bin/region_to_patients_generator.rb100755002.02 KBbac1a71b320b0d6f36ed12b150ddf6a0ce6135a86a00b0bd271bc0122b58f231
bin/relate_CI_to_association_value.rb100755002.52 KBbdd75c11030f75a057b0fe6414346818a5a2a75ed9473615984eb18a53911f68
bin/setup10075500131 Bytese201190bc24e9f00849b3efa5fbaece2cbf069703232e50c7fa15d41c47f2ead
external_code/generate_boxpot.R100755003.48 KB6bb3505a87b7e6a3cc3192b84d61ffd9a739523c45ca5a531ff28508cc6d912a
external_code/get_clusters.R100755001.36 KBf6453bb0cce8f44f0c724c9106469efafc8b463f660ce7c033bd7d297a5f2192
external_code/lines.R100755002.68 KB8009afe7f0a0ac06d0703bb5daf18c33759f08f42ff71c3b955a345334da56dd
external_code/plot_area.R100755002.65 KB04430c2c02e85978a7ee3431bfd0f2890d7c07e72b2580a8211660f15c84c347
external_code/plot_boxplot.R10075500820 Bytese46b1fdf059be0071d63eb52ec5f4d1979eea1e0242a4ca497233c6696937e21
external_code/plot_density.R100755001.14 KB4331a4c77d49095fd47e305ff416bd7914aae8a02207b42ea9135f3f1ce911bc
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external_code/plot_scatterplot.R10075500616 Bytese8d1695fcd79b58d854f1671c5ccda71d6ff02378048ba91ac8dd98cc20461ea
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external_code/ronto_plotter.R100755007.25 KBad4900028142f3ed5838bb803d44de33850fdafcb0f75b1c516a2ec7319ac8ab
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external_code/xyplot_graph.R100755002.13 KB8f358d5928fbdbb4c5e670f274a1978ff2eea371cda0c94733a6fba8d456ea6a
external_data/biosystems_gene.gz1006440037.6 MBbe10184058da52410ffa055e2a6885fb2bf012e4c988ae20ddfa14a252f4b4b6
external_data/bsid2info.gz1006440054.2 MBa761a75eb407b6757e4c71f95d3f9600d281c7c829e2e18333b4b09e0df36e60
external_data/chromosome_sizes_hg18.txt10064400293 Bytesc0fa2696054d3bc11f9f3c5fb50ae0435fe265fb81a9da8c8e1e99bc6d2e481c
external_data/chromosome_sizes_hg19.txt10064400293 Bytes230104efdb86bbf4b59c0a9b9ad319457e41e1641e1734c03ccb023be158ab09
external_data/chromosome_sizes_hg38.txt10064400293 Bytesec5c2bd82b356de7b1c7b99af064e9d2905191d43713456c5d92721e7c627840
external_data/gene_data.gz1006440023.8 MB06d0671b6918f730c22fc72c0118d7565a925d87854c29f5bdca2333852a0c72
external_data/gene_data_with_pathways.gz100644001.16 MB022520b8f6d9132a1d7859c076bc27e1dafd64a4051052edc14fd6115bd8861a
external_data/gene_location.gz10064400528 KBcd84fdaec1d00ea783863be5d7c9b3996b1ba83661e19bca6d11e31e00cf123f
external_data/hp.json1006440037.2 MB60bc6d1f1d3bfec534157300c1abad69ea9985f5b6be89ad4591f509f2a7272d
external_data/hp.obo100644007.01 MB92d59c757ab007b0dbdc846f54120f21dab05108e3a3a0ef419cb90ac0214f2b
external_data/mondo.json1006440090.3 MB155f80ad718113fa32dc75a533fcb639ac054df6ab2d37731173388d7eea09a6
external_data/mondo.obo1006440029.4 MBb17fab2934258a73d67da5cf435447bc3be15638ac5785c4c1c718ca804e823f
external_data/remove100644000 Bytese3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855
external_data/uniq_hpo_with_CI.txt1006440080.3 KB11d3ca9e62d5b072817ae5466d2c758b0e52b96d64bdce958e04843593d57b83
lib/pets.rb10064400102 Bytes916195571a0f51affc502a5628ea4ffaa3e412f82877fd195d1dff59c84dd296
lib/pets/coPatReporterMethods.rb1006440017 KBdbe4c83835c21efa0a83a6cc140818660181b3df425a2755ab487186b192f800
lib/pets/generalMethods.rb1006440016.8 KB7c3412db3c4ae055fc8966c013c457a713e0d2934be4c40bb8865705cc0c61d6
lib/pets/phen2reg_methods.rb1006440010.2 KBf1a8028aa415090014cea9f8db5d014b5cca01487eca04c4e7023b014bb9dc65
lib/pets/reg2phen_methods.rb100644003.46 KB1d5820d49f208eba35bd0e5afccf9696fa78c5cbd48e138abbf4d8ac4231f5de
lib/pets/version.rb1006440036 Bytes06b0d81e2c71b38f78f1e1d87d30ea286847df1e470a2e130629f0e9f9a9dbb9
pets.gemspec100644002.73 KBeade712c76b6ba8f6785acb26e12235d59bdaf5bf40943643d1c110f41881831
templates/cluster_report.erb100644001.46 KB78b13a6484e5ea57781e661a435774ba326df27cbc7cfd2a7e2ba3dd9b81bdf7
templates/cohort_report.erb100644007.39 KBbff6e7b6aff1f68297286cb67f4a637c5c8a767184c36e4e1dedd0768c33cb3a
templates/evidence_profile.erb100644001.28 KBce7f9616562455ac64db4c3b201152c6c3d223ba17761819a32feb20a9ba2a1a
templates/patient_report.erb100644006.47 KB8c3af143cd3dd193c109d7c8a42de4c2fc0a924d000988302e2f2fd3d3cd4f0e
templates/reg2phen_report.erb100644001.67 KBf984124c3b8e007e737d1278e2169b2c93fa4bd6859dfd27aa8f7e141b9843d8
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