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conf/primer3_config/interpretations/tstack_tm_inf_i.dh | 100644 | 0 | 0 | | | 2.08 KB | 656199e69136c36bf5bd907d35fd2e02db557f5371f451047650d227de9a5fa3 |
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conf/primer3_config/stack.ds | 100644 | 0 | 0 | | | 1.03 KB | 4def88bee217039784583159a69ea50cab4e9ea5b82132f7938dfd2866d0524e |
conf/primer3_config/stackmm.dh | 100644 | 0 | 0 | | | 1.12 KB | ec457186fee79b686a74b464881c5c6a9c158c258957ff2b372f5e6d62fedf51 |
conf/primer3_config/stackmm.ds | 100644 | 0 | 0 | | | 1.08 KB | 0701ef016c5f5c4f484c49acec1c679e35778206520ba1c7690dce8b550df6d4 |
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lib/bio/BFRTools.rb | 100755 | 0 | 0 | | | 16 KB | b05f95ea827f5865b38ffccd4d8ee6f263be134d73df6e73b1ae11410376e12b |
lib/bio/BIOExtensions.rb | 100755 | 0 | 0 | | | 2.96 KB | 40935b10c66558afdac0bced2f6306329d6877bc812d3e646ce4a750151a7ac1 |
lib/bio/PolyploidTools/ChromosomeArm.rb | 100644 | 0 | 0 | | | 1.41 KB | 2539a5f67543ab4127f3a8475c37c722cb9d85e37b09ce04de109918d560e1d3 |
lib/bio/PolyploidTools/ExonContainer.rb | 100644 | 0 | 0 | | | 6.13 KB | af65cd8f2e15c70c30b3c8e81deea463cc8c30fb7433148e8f75a4b11bd8cfa0 |
lib/bio/PolyploidTools/Marker.rb | 100644 | 0 | 0 | | | 4.51 KB | 0c6206dc238aad1c4036b90b3c8002d953909b2c5575a09eb1c7b157fecbb12f |
lib/bio/PolyploidTools/PrimerRegion.rb | 100644 | 0 | 0 | | | 749 Bytes | 0eecdabf4f32e4a934356ac6ba8093c6a6e7e3642ab945a637cd700645e985e4 |
lib/bio/PolyploidTools/SNP.rb | 100644 | 0 | 0 | | | 23.6 KB | e868c76b5507e3bc7dd352eecaa293754ce40c50693e73decbcb3ffc3a02eae1 |
lib/bio/PolyploidTools/SNPSequence.rb | 100755 | 0 | 0 | | | 1.53 KB | 203adad7f822127a827d711b1a2a43dda0d6f024faa90286b5e76fc2bfca65fc |
lib/bio/db/exonerate.rb | 100644 | 0 | 0 | | | 8.32 KB | 50b7a4535187cfe4ff7393c8844f2b04a32ee99bc46c11cd95eda774e2007a17 |
lib/bio/db/primer3.rb | 100644 | 0 | 0 | | | 20.1 KB | cb301cada2a3eaaa17271082ac099d0ef01c5ff5d312c4dd3eea4e5a99d39e51 |
lib/bioruby-polyploid-tools.rb | 100755 | 0 | 0 | | | 615 Bytes | 5afdaae82c5870275a3abc23f12dc6b59f94966b3983f6e86b2157a059e2c504 |
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test/data/LIB1716.bam | 100644 | 0 | 0 | | | 902 KB | 29964408c48e148034de19395ae63ee9f78187f16a565930499f7b455e780f4f |
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test/data/LIB1722.bam | 100644 | 0 | 0 | | | 1.06 MB | 05d86de65902d2876e4e624d8e2e8b070fd2766bd09f48fe72a88c8b9acb49a0 |
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test/data/PST130_7067.csv | 100644 | 0 | 0 | | | 25 Bytes | 9ea0bb2fd0c87fb3ee06980116d5ab56fa6ba2e44729959f8f28f3b9ec1be56a |
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test/data/PST130_reverse_primer.csv | 100644 | 0 | 0 | | | 25 Bytes | 9ea0bb2fd0c87fb3ee06980116d5ab56fa6ba2e44729959f8f28f3b9ec1be56a |
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test/data/Test3Aspecific.csv | 100644 | 0 | 0 | | | 435 Bytes | 8ca8f8a5975f964ba31702e813b5a54f3431bf615cbfe2473a3684a745549f80 |
test/data/Test3Aspecific_contigs.fa | 100644 | 0 | 0 | | | 20.3 KB | e20f31b1e9a237b38f2c54f1d38211b9ded34aaa5d0032eaed01501939b728c9 |
test/data/bfr_out_test.csv | 100644 | 0 | 0 | | | 477 Bytes | b360833056a263b9f6b32cf15ab6e652a26e3e15ec6e973e4af0487116427717 |
test/data/patological_cases5D.csv | 100644 | 0 | 0 | | | 119 Bytes | 7480e05ccf6d43bd6a4c6b91f172d79c576e6b784479b598789cf0b734c9f5b6 |
test/data/primer_3_input_header_test | 100644 | 0 | 0 | | | 132 Bytes | 8e4c602056f89c3f6515aff152570ea8fbea3619545181256af49c0c95b91742 |
test/data/short_primer_design_test.csv | 100644 | 0 | 0 | | | 2.09 KB | af4ff3547cdff7579d6d11342a48be5c263421fc87eae543b6436f3b3a2ee66a |
test/data/test_primer3_error.csv | 100644 | 0 | 0 | | | 521 Bytes | efd3e5cc1ad6e93a391bc9b8f9154d7eae6935283b4bb40d1a14e2371684a814 |
test/data/test_primer3_error_contigs.fa | 100644 | 0 | 0 | | | 24.4 KB | 02b76b0a2870e0b1ffa0eeff2416a871b624fa37227fa07360c4727f2467d24d |
test/test_bfr.rb | 100755 | 0 | 0 | | | 6.67 KB | fbc156b86eabd757f416d7def564ef9e9fcd39f9af9275fcf270fb76c10ffbcc |
test/test_exon_container.rb | 100644 | 0 | 0 | | | 453 Bytes | 60d29d66b5773baa08ae08072e667000bf4e01abd73b90d76ef6fb5c53e348f0 |
test/test_exonearate.rb | 100644 | 0 | 0 | | | 1.57 KB | 10df9697e6b033404631e36b888c0dda6665b9a46c419da58db4d97e1bf9d2d9 |
test/test_snp_parsing.rb | 100644 | 0 | 0 | | | 1.32 KB | b3f5edaa87e12c50a0112fdf63d427d8eb88b85833facf726d080e1a6c913585 |
test/test_wrong_selection.sh | 100755 | 0 | 0 | | | 273 Bytes | 516084754f41452393bfc67ffef31a287eaf0453349b0a452393b4f1881f3efc |