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Contents
module Bio::PolyploidTools
class PrimerRegion
attr_accessor :snp_pos, :sequence, :chromosome_specific, :almost_chromosome_specific, :crhomosome_specific_intron , :almost_crhomosome_specific_intron, :homeologous
def initialize
@chromosome_specific = Array.new
@almost_chromosome_specific = Array.new
@crhomosome_specific_intron = Array.new
@almost_crhomosome_specific_intron = Array.new
end
def tail_candidates
@chromosome_specific.size + @almost_chromosome_specific.size
end
def to_fasta
">Primer_#{snp_pos}_#{chromosome_specific.to_s}_#{almost_chromosome_specific.to_s}_#{crhomosome_specific_intron.to_s}_#{almost_crhomosome_specific_intron.to_s}\n#{sequence}\n"
end
end
end
Version data entries
14 entries across 14 versions & 1 rubygems