rbbt-util-5.37.6

https://rubygems.org

id: 182884

number: 5.37.6

platform: ruby

spec_sha256: 09ebd7eb8a3fb0f67a07c4837c5e1a61339c0f7e4a9a71a53091b40181b739bc

sha256: c9561687cf9ac76b1b99c9c6afe9b7ac4df4556d5a6d7bd4d4b4433bc293a1b7

created_at: 2024-05-13 08:16:16 UTC

updated_at: 2024-06-05 21:12:03 UTC

position: 20

version_data_entries_count: 402

uploaded_at: 2023-03-09 23:32:19 UTC

indexed: true

has_extensions:

extensions:

Gem size: 337 KB

Version Data Entries

Total: 402

Unpacked size: 1.5 MB

Full Name	Mode	Size	SHA
LICENSE	100644	1.05 KB	724d646d9129a76a50d21ec8316842a92052c0217c4b57178ac386b70e968ee0
README.rdoc	100644	3.51 KB	8cebc2c23c4f48f132b03ec0e203e8eb77673d51b43a085240a184aca1461350
bin/rbbt	100755	6.87 KB	01dc84e77707a41be32f53b6028eeebe08c8d77848d115b6c5ee6ea0d2dec83a
bin/rbbt_Rutil.rb	100755	134 Bytes	7be0effd914b00b6aafb719aed14c368d7fa468610c4d0b601829aaeb27b677e
bin/rbbt_dangling_locks.rb	100644	254 Bytes	1a10a852e4001355b1725cf61ce2b2f4c3961d41103ed75de17a97252db6fe1a
bin/rbbt_exec.rb	100755	765 Bytes	769e1d89c04d4dfeffc6e6e40693bc2fb31db13b77957f9364891dfaba800f4c
bin/rbbt_find.rb	100755	1.51 KB	99ccacfa3aa146e18ee7203276e9ace159e3d708eee022492b96511f4416ee0c
bin/rbbt_query.rb	100755	1.43 KB	0ea9cb51375db0df4908db4c58526127c3ccc7e68eb079230d0dd5e0da003d56
etc/app.d/base.rb	100644	1.02 KB	75c521487c5db8b6bf4d88b401982c24f4793f13f0b99a65d155750ae5a6146e
etc/app.d/entities.rb	100644	1.18 KB	7aad80bea5bf45e47a5a9dd41db06674ede2581e267319f4895cf84b0db3ffc6
etc/app.d/finder.rb	100644	1.14 KB	1e73dfb726e89d73ce22e9768ba83e6c1c7b921aa3f2ffd671367c0382908247
etc/app.d/foundation.rb	100644	366 Bytes	cca28b2081cbec869369974b01d5d9ef44be3c2dfa4cc037a5bf892968c8191d
etc/app.d/grid_system.rb	100644	82 Bytes	a507e8977b3b0644267c294870f0980deb72107565bdf34405f24fd9524f5cea
etc/app.d/init.rb	100644	186 Bytes	59fa1661c6e46247709b224928e86b4119f7fdfe94ec801b0157590390fe3bf5
etc/app.d/knowledge_bases.rb	100644	535 Bytes	3f72685079ff0ab550cb4932b112315cbd1e5a71453e401784119e4595c652e9
etc/app.d/remote_workflow_tasks.rb	100644	173 Bytes	1a87b65207d921be0863b5cdb9b238337a49838f9dc0c4f1ed60b5c18765e990
etc/app.d/requires.rb	100644	253 Bytes	8f02d2a4df0778337a41d55775fcc66055c7a1b96b2c28b912f1b59ea59a6396
etc/app.d/resources.rb	100644	773 Bytes	d7a08f35fb42a479cb3a29950e77e9f42b1cab149d989db5bc76fa4492ffbc4c
etc/app.d/semaphores.rb	100644	556 Bytes	24cc6a910310861974ff253063d240ac9a4421c7959ec930447d7c6e9bac2fa9
etc/app.d/workflows.rb	100644	400 Bytes	741ddeb588905cb59f58fce53b2f24b6f19237eca6fcccb46f0f2ad37f50fd76
lib/rbbt-util.rb	100644	433 Bytes	56052c15b4e973c1c76abb3ab38146f8c048f44881efe188c7e5303fa85914eb
lib/rbbt.rb	100644	105 Bytes	071d95076d0d983b0616087a140d9b59b3104601d052a32d6fa0c0759bb85cf7
lib/rbbt/annotations.rb	100644	7.49 KB	762618eb4145866907267557b91b234c634463e7d03e9b69e63896d4f18d40bd
lib/rbbt/annotations/annotated_array.rb	100644	3.31 KB	186eef06a800ea5de4defa432e44b78266726797149a99a0dec50c33ec6917bb
lib/rbbt/annotations/util.rb	100664	7.49 KB	4f3c8ecc006cf6cc9a9e3776dfec6a720ed2e3f9eec5ef23e709d61bfaf9557f
lib/rbbt/association.rb	100644	88 Bytes	ff2653692ea751ac4a029ed83c6efb2e42edc4a977d01af08ba8026f29415748
lib/rbbt/association/database.rb	100644	7.4 KB	14fd9a755e8d3e93ce6d661f07928d57d76aeeef0804945f688e8b8f88cf923d
lib/rbbt/association/index.rb	100644	9.34 KB	8f0b62c9324448441a8aed6f753d794bbf0385582a8e54eeaaf1e5026a47699f
lib/rbbt/association/item.rb	100644	5.8 KB	07963a284864ecb6a5cd195a873afeb6b397c03c04fc671cd5939d8513fd732a
lib/rbbt/association/open.rb	100644	1.35 KB	0f942993cb234854d18330c388c8059df891acd237c855a29c27970e264d2ac8
lib/rbbt/association/util.rb	100644	5.6 KB	16c4bce9ddd42d30314098ef91d8032aca2d03444b7f279ac2030755424eaa47
lib/rbbt/entity.rb	100644	9.83 KB	b9f8a6975fd85dc869bba1d5b36e55dba3abcfd2242cfe08c62388458a8a99c4
lib/rbbt/entity/identifiers.rb	100644	3.6 KB	2c0c545e1debb175120875cd8a4b24f01bac1e099c5fe88b7e8ed76f70ebff2d
lib/rbbt/fix_width_table.rb	100644	6.93 KB	dadd82a4b4a203706ae5f814c7a5dd12ad7b13d0a85900d800f9fe389b8f75db
lib/rbbt/hpc.rb	100644	148 Bytes	9d3afaef8208bbea08fa0cbeffe4b9a98f33b7eb17300a7128b192334512808e
lib/rbbt/hpc/batch.rb	100644	22.2 KB	0632f12c5d754091fe09459ea82287febb0e4e7bf6a63fc086cc93101b12b140
lib/rbbt/hpc/lsf.rb	100644	3.76 KB	5b81b1d5e4743ef930bb6bf1c5c03475c024e156667c9a0dc43c3a8ef15f7248
lib/rbbt/hpc/orchestrate.old.rb	100644	7.58 KB	274cc162a241c667cc4cd1a368dae2cb59492bcba3aa6c1bb0e5bda1df4b4481
lib/rbbt/hpc/orchestrate.rb	100644	3.48 KB	0f51f81a7699828584447f327353de2fa5a660b8fac704187de71c31d90a2272
lib/rbbt/hpc/orchestrate/batches.rb	100644	4.39 KB	5265dab6ed0dc07aa927b89c4d17454b9fe0a6f4e8cff179c97ae69b244fb573
lib/rbbt/hpc/orchestrate/chains.rb	100644	2.64 KB	b88a1a4a9e5dec65a42e06771f43e5c94bb34b9fa8f1da468164812000288570
lib/rbbt/hpc/orchestrate/rules.rb	100644	2.34 KB	70c6e110fce1207fa4f76b13b326e93c3e387c37be163fec280df47cda32b98d
lib/rbbt/hpc/slurm.rb	100644	5.18 KB	ef620c70a60602e1d933ce4da0844c2c740de7b6deaf605b4ed37b1cf686afa6
lib/rbbt/knowledge_base.rb	100644	872 Bytes	f1284e01f3aaadc96404233be911691e630c54875f6c8c50b3b76698d2f730e5
lib/rbbt/knowledge_base/enrichment.rb	100644	321 Bytes	4d610ab3a665798f66bc3818bb2b70bc4b5c61bf005e936fc361dbc6ebfc5c01
lib/rbbt/knowledge_base/entity.rb	100644	4.13 KB	085ed50a185c4bac399b2ede9c75d1ab399e3a31055ad7961c9889a91c3f5f4e
lib/rbbt/knowledge_base/query.rb	100644	2.65 KB	f015e49be75d99e59f6b6444a69ddaadec95324dca34740b17f3b2b76f1b2365
lib/rbbt/knowledge_base/registry.rb	100644	5.95 KB	f672bb928579a1dcdf04d235a9910d64bf15e4b6be7e5b6c6ab2939c3a38a033
lib/rbbt/knowledge_base/syndicate.rb	100644	668 Bytes	bc1301bc9d3b2e13bf7ca56e0e9297049b43392a1929d79b158370ecb5ab8534
lib/rbbt/knowledge_base/traverse.rb	100644	8.55 KB	d7849e25e80e5405d9d91d937f983628a412b63c64d7bd21d4188280fe24a952
lib/rbbt/monitor.rb	100644	8.56 KB	a419178d37187b38429468517d87b4acce431293e288f06b941f89327bcb1dbe
lib/rbbt/packed_index.rb	100644	1.94 KB	c05bec3a17734e69204342465d7949671dfcb87c2a47fb6ff5b279d0d3eb8b99
lib/rbbt/persist.rb	100644	16.8 KB	48d374405af2f79005ea233b48f4896cdce18388ff734febf34610f07f55cea5
lib/rbbt/persist/tsv.rb	100644	5.71 KB	3edd064d2300f929425bda3e5519a69da40f1a40de463a9eeeaf0c535d281ea3
lib/rbbt/persist/tsv/adapter.rb	100644	4.18 KB	3abb4390ad7ae075eeb1a1d2ab746467f2cb3f9678478ab701e508b233982bff
lib/rbbt/persist/tsv/cdb.rb	100644	2.74 KB	befef349a046e10e332eb34bffc6a3cae1f850355733db5fca507efff85df144
lib/rbbt/persist/tsv/fix_width_table.rb	100644	2.46 KB	3b3e44f8b2c9750213f0df6f1f00cabedc38fe3d189c5c59ea7d8e4902a7d9ca
lib/rbbt/persist/tsv/kyotocabinet.rb	100644	2.08 KB	18c9253e85b1ae0b5ae5dbfc00f43dc8425ba9619d50f021c260cebe358fa67b
lib/rbbt/persist/tsv/leveldb.rb	100644	2.24 KB	76725a7ce1c2ddbac97e13d5b73f7e4d79b4cfae14b4aeb4588e4a8c5c5795bd
lib/rbbt/persist/tsv/lmdb.rb	100644	1.48 KB	2efd65a2273a708c78c06aa8eb57b360a8d1d8c6fab52e64f5902e1db05a47c9
lib/rbbt/persist/tsv/packed_index.rb	100644	2.28 KB	cbcd5753c9c677ce46cc30816c9d169cc8b808623e325d458fa03618d16af6c8
lib/rbbt/persist/tsv/sharder.rb	100644	6.21 KB	1d0065301880fec05b80e8c6b09378c0b4ad213bd9e67f19871c4b0e33f641fa
lib/rbbt/persist/tsv/tokyocabinet.rb	100644	2.78 KB	97057e2d7da7bd4cfec227b11aaaa2ec2e433187e9aa1cb4ecb3aa786393b477
lib/rbbt/persist/tsv/tokyocabinet/marshal.rb	100644	487 Bytes	da46f60264051d41ed280c337b266ec355e6cf0f61eefbd1e58eb3ac5d99eb84
lib/rbbt/resource.rb	100644	12 KB	9b17582c2fee05cf0d5d5715c13335693bfdfe5f8a2203624a4c00f557d7b808
lib/rbbt/resource/path.rb	100644	13.1 KB	bdb41789c8427a349161381f38db348f3e9e66b69087df3a313d9d359cd9e50e
lib/rbbt/resource/rake.rb	100644	1.39 KB	28cfbcfd82ed0495e3252bff822485cafaf591cfbaf5fabbe858bf0a22ff87fd
lib/rbbt/resource/util.rb	100644	5.18 KB	427a258ce2f2f6b03a8665dbbafb620b62522512f30403d62b3e894de6767f38
lib/rbbt/resource/with_key.rb	100644	537 Bytes	8c0bc2059925a473cc8994a15d57663afb6e74835678281c4cfcc45dc1fbc5d7
lib/rbbt/tsv.rb	100644	6.42 KB	b390a148bbc9182d5ac464edb365ffc2ae8b809a76281f824f03cc9ebdaf5612
lib/rbbt/tsv/accessor.rb	100644	20.7 KB	8ff71c1d67b9877b6eabc7dc49effa7aac6997524b55cc21fb73edfa39c516c4
lib/rbbt/tsv/attach.rb	100644	10.4 KB	4f499e7a38278e790ea305b028885df59ffaf2865196d35d54edd394b83c6e6c
lib/rbbt/tsv/attach/util.rb	100644	11.6 KB	ed5fc2be7b28ad257f0dfe14918783e2795c5fb954add40fbc4bc40310270e61
lib/rbbt/tsv/change_id.rb	100644	8.39 KB	22ccb3a56e40e010acacdd4b89458428e3999cfd1caa454e18fdaca3f7ba891c
lib/rbbt/tsv/csv.rb	100644	1.98 KB	82722776ba00517c0911e18468cdb2993c91a63bab5b7b76f68f0e96af5442d8
lib/rbbt/tsv/dumper.rb	100644	2.26 KB	1e665b9994a66a4b0610e776de60460b37f2f955daeb8e7f87fa9fbc640da1f1
lib/rbbt/tsv/excel.rb	100644	7.42 KB	52ebed0499ba55ab6d9f2e424caf44bf9ef6ee0478ddfb404e58c59b07fedc76
lib/rbbt/tsv/field_index.rb	100644	1.32 KB	3f476e6257a4435d7b08a97c454dd27a70e4820d3f6da6fdd528e4d5a1fae244
lib/rbbt/tsv/filter.rb	100644	6.71 KB	e3796e2dc83160727d6d9425faa5911d446510a7d0dd4d5a131e729d71d0289e
lib/rbbt/tsv/index.rb	100644	8.53 KB	45d9e6aa1836ee8ef63c738b6914dc8c46d23f25298f1a97d20aad9c9385e53b
lib/rbbt/tsv/manipulate.rb	100644	21.9 KB	b908800fedc1125d664b13213146095833d8d92a5da689b8aab1968f075ae59c
lib/rbbt/tsv/marshal.rb	100644	276 Bytes	b368746cd6c78361540a22337e32176e20db869797c172d7f5ad46800add651e
lib/rbbt/tsv/matrix.rb	100644	1.21 KB	5f7dd5d4a9396a048ef334008ac7719cb0278494490d000ef08ba6e70e706c86
lib/rbbt/tsv/melt.rb	100644	1.13 KB	18e70ba63f2739e4295530340507ada30600ecf5ec0cb7fa951cb6cd79ff4c6f
lib/rbbt/tsv/parallel.rb	100644	106 Bytes	461a7907db38283e179d0f4e90507380c5fe3d2c82ac58175bda9b1c4b4edc17
lib/rbbt/tsv/parallel/through.rb	100644	2 KB	3f4ee297ec5bdd0f0055fd05b3fdedf4cb43026053117e970690966fc9311961
lib/rbbt/tsv/parallel/traverse.rb	100664	20.2 KB	f4567081ab447d81f8ed8c6ecad7ebcc0839da96b70a281f6e87308dae1dbf03
lib/rbbt/tsv/parser.rb	100644	20.6 KB	dffa4de94c799e7b48f351071b65faee7832d5d6597a1ac5822b8eaaee2482c9
lib/rbbt/tsv/serializers.rb	100644	2.85 KB	7a904bcca28b7e704e8cb024b94e575f93b703ddee112cb540975cb026a75952
lib/rbbt/tsv/stream.rb	100644	9.78 KB	6531d0803e62191a9e9351ca83a7e26f2e426de47381943d6f4841bb30dede5a
lib/rbbt/tsv/util.rb	100644	10.1 KB	da21f44b80f08a201306ad4a497a6ba915cf3fb31c69b05c77275c7a3f883944
lib/rbbt/util/R.rb	100644	6.99 KB	2c5a6de218a09f2df883ba8b3a403f435b2e499af7da54903b9958fcac73efaf
lib/rbbt/util/R/eval.rb	100644	4.48 KB	255d4cbcc125cdb8d55cb8e84981490e1bf3113ad162ba2afca0b804bd6a8ebe
lib/rbbt/util/R/model.rb	100644	3.9 KB	fc4329319cf7db9e30cbd0318812916e9d773174977b1c9eae47b08a747c69d4
lib/rbbt/util/R/plot.rb	100644	11.1 KB	94e46c3a77c5d043c3e9accb3522b85df24da1dde3b699d20e75f2805fa3c912
lib/rbbt/util/chain_methods.rb	100644	2.28 KB	48e637e8d6d2430e32d81b0aafd68093a8706854ef58cd60e6d65c1884861cac
lib/rbbt/util/cmd.rb	100644	7.75 KB	4f2f7ab0a33d9cbfa32b591116bdcf0be7c9e397a00fa83ecb5121c55114c7b5
lib/rbbt/util/color.rb	100644	6.68 KB	50bb70b4db6725418d371986f79f3f68a6416b389859a563239ff46de8c17918
lib/rbbt/util/colorize.rb	100644	2.33 KB	b96e8e397c73a589670e323b44a76af2d0634970dd4aaa522dcc2d561479adaa
lib/rbbt/util/concurrency.rb	100644	82 Bytes	62ccf5602fae88cd070d52cdfa2874e257fb3f3a75fa01977d49746dae8933af
lib/rbbt/util/concurrency/processes.rb	100644	10.6 KB	8b19c4dc8ebfc7d0658c53e597d2c6df917f39a9ba33daeb99f6346cd6aba1b3
lib/rbbt/util/concurrency/processes/socket.rb	100644	2.56 KB	fdb2f3b75f98c64a1f17769b620eda60c799c29d04ad334b61d974fdcf17488d
lib/rbbt/util/concurrency/processes/worker.rb	100644	7.67 KB	b4b30460aed17f48b9aa415da9b9d4530cb97f018dd80c905379bde661d1112c
lib/rbbt/util/concurrency/threads.rb	100644	1.62 KB	6204174093b4687eb807fa0b9209dea8e2b6424463cdae3edaa5a23ba581f3d2
lib/rbbt/util/config.rb	100644	4.11 KB	1ff51e2ddc632fecdaaa0cffabb808c6c73b0cb798bc9b84978d4d7e29bfb8f8
lib/rbbt/util/docker.rb	100644	2.21 KB	3bf6d6df6d845c7e48c13fd239ea38d7328ac4def4b3763982209089daa66c81
lib/rbbt/util/excel2tsv.rb	100644	108 Bytes	d417c96f4aa36a2ac73b6f5408ed56170b6e54ecabc76dc07013faa85f1a95aa
lib/rbbt/util/filecache.rb	100644	1.76 KB	719d78db5ba37f39b4a32d0ac16a8c46a8fc48c7db27286f7e861b5b03ef33b0
lib/rbbt/util/log.rb	100644	12.1 KB	9d070c09eca274a709903aceaddfc7c38da9dee8dda423f146db06ed02cd140d
lib/rbbt/util/log/progress.rb	100644	2.34 KB	aec1faae62d0df1ee09ae54ffcd88bc69e7396f6506a96df3c5b7a7d6d8ff550
lib/rbbt/util/log/progress/report.rb	100644	7.82 KB	49a394116265f2505e7d877bb8927e78b74a72d8cd43cfa52795c955a0708186
lib/rbbt/util/log/progress/util.rb	100644	2.17 KB	c32950d33db680e21b2576bd63cf4eb3bbec82d7db1eadb7a0b1f6b47735a492
lib/rbbt/util/migrate.rb	100644	3.81 KB	b01cf88c6cbe4205c361e6c314578bed8acb0c1ece30b70f66775774a2bcd9c9
lib/rbbt/util/misc.rb	100644	3.29 KB	6ba616a8e9f40f01be8738c68d9b087720234092540ae3489909af9710b699e7
lib/rbbt/util/misc/annotated_module.rb	100644	1.93 KB	33f2ba0df11be402b8cf53abc98237c51e6eab1888b97c4ba5e3eb131e8fcbfb
lib/rbbt/util/misc/bgzf.rb	100644	4.21 KB	07a3af1133fa28eb80dd6351e80ac635980390743ce55f689588a7695d065c28
lib/rbbt/util/misc/communication.rb	100644	2.55 KB	7c24c40591df2bd171d379c8ebef355411b8b9a74badbd99171ee8da33ea6f38
lib/rbbt/util/misc/concurrent_stream.rb	100644	6 KB	a964783449298c3687f0f0d8b8e57e400bf81e27789540841e4d67c1b8a060ce
lib/rbbt/util/misc/development.rb	100644	11.7 KB	bc0907563fcdf07a48a5c340c3080dbeaebefb0559e373c810fe1b23c23be499
lib/rbbt/util/misc/exceptions.rb	100644	2.07 KB	5b2dcb6acddd939bfd7ebaedacf95889378b0e4f49b51e26e9fdf186eb4418ac
lib/rbbt/util/misc/format.rb	100644	5.74 KB	3e4618e501d7b13c7c4b034d38692c59f18220f0d531be28ad5e565a02f16390
lib/rbbt/util/misc/indiferent_hash.rb	100664	1.79 KB	c54c5da5481b736823471ca348a9b18f204d167951142055fd827b361ac24766
lib/rbbt/util/misc/inspect.rb	100644	13.5 KB	0ff56c800b7107b2a068d4ebce62320a4e24e16bc208dea1b3743712a0ea7ee6
lib/rbbt/util/misc/lock.rb	100644	2.66 KB	fbfdb4949553497d6013d935f5ced7e5beff527d20d5904283a8b4f9c416a9eb
lib/rbbt/util/misc/manipulation.rb	100644	2.76 KB	d9712cf895289f69626ae617ed209eb93bca9c9af616f8fdf7819a4ed195f6b4
lib/rbbt/util/misc/math.rb	100644	3.09 KB	774a5468fe16297cce421aa42eb61e417f4403abeaf0a7721e25d1fab0451c84
lib/rbbt/util/misc/multipart_payload.rb	100644	4.83 KB	5b2606ffafebb290a8b32906b147428308a354a0fa0f7db0ee036602c413322a
lib/rbbt/util/misc/objects.rb	100644	3.13 KB	cc9c7ef83d3c38b2e9e9edbc4008d935686c97901b280d15692155f333aea142
lib/rbbt/util/misc/omics.rb	100644	14.4 KB	6d389134843e64e8ec47c03c80456095ec6d14ea8dbd5fda4a8967fa26b5f37f
lib/rbbt/util/misc/options.rb	100644	6.62 KB	79c1fee3a3ada0765e6fde3bbb808d2954c2458cf4355624c8eb03327f3fbc5d
lib/rbbt/util/misc/pipes.rb	100644	21.4 KB	eac051f6ccdbe80eae073544977d37a35025b21e1cda1032d01f8bb46558470b
lib/rbbt/util/misc/serialize.rb	100664	543 Bytes	330b40e6ec078a3b26e9ef87860ba16f94403241e9dfa72434e7bf0a7a80419c
lib/rbbt/util/misc/system.rb	100644	2.3 KB	09671260f21b7afe48c2d5128800700b05c8e7871ea21076735325e65969d529
lib/rbbt/util/named_array.rb	100644	5.07 KB	f0d2c832020aa0914f5df0be9ee3a3ae202f486ebbd9a5d6dcb9a1100c3c2687
lib/rbbt/util/open.rb	100664	23 KB	beca06f4597583ba9e0f18dbe4e7d77cde1bbd68f2b290f0e10aaf9282bc15ae
lib/rbbt/util/procpath.rb	100644	1.89 KB	016c6702e8fb9ea93406a4dba2bb2ca51246febd8a39e7d0dba22b6b6442e406
lib/rbbt/util/python.rb	100644	4.65 KB	a2d32d32d457e2b261d4705dcd6b8879c32bf7aca68066281195ae8cb14904e3
lib/rbbt/util/python/util.rb	100644	1.07 KB	fda77d797e70a36d87a834757b41f32990903f2de92946cab869814e75ae61ed
lib/rbbt/util/semaphore.rb	100755	3.46 KB	e4f139a8af9869150981b4d071131a879fce9b05a79ed3d7a1a2889e25066bac
lib/rbbt/util/simpleDSL.rb	100644	2.21 KB	f2285087aa85051379d494e9597fc21c58bd0401e79addfeb32eb340d719553b
lib/rbbt/util/simpleopt.rb	100644	196 Bytes	2ec6f1c8b97ecf4873091420a01f62c9b4b37f96d45d675cfca09e2dbd7acab5
lib/rbbt/util/simpleopt/accessor.rb	100644	941 Bytes	b823c52ce78f8129ae4fb9197daf3996c8b6a9671310ee3058438c4ca5c8c5a1
lib/rbbt/util/simpleopt/doc.rb	100644	3.26 KB	196313438b519a896deb1fb1669e64cc1763b9d8140aba165de2a18a721a1585
lib/rbbt/util/simpleopt/get.rb	100644	1.51 KB	d546741a856607f0ffec6c86c01cc0361877ff1635f2c186977b7efed82c1e1d
lib/rbbt/util/simpleopt/parse.rb	100644	1.77 KB	8f510abd2c96431bb4946494efef30a49d1c2eea350d34deb3e7ef223fce8327
lib/rbbt/util/simpleopt/setup.rb	100644	793 Bytes	2074fb22e6b090ceb401aa512f8205c5bbddf49cb96f512aee472ae944e890ac
lib/rbbt/util/tar.rb	100644	2.5 KB	200dd9b949d8983ab3c22da70f8eddd9d595d3180f6d55761e4e3d434d0604ed
lib/rbbt/util/task/job.rb	100644	7.3 KB	d808f8f1d9b66b20d781f2799ec20b1bd8854443143a00400d26112059954e41
lib/rbbt/util/tc_cache.rb	100644	394 Bytes	e1d654fef6a05cd7fd4f8e33e538baccc44f5f1cf4509dfc33b50aa71106b616
lib/rbbt/util/tmpfile.rb	100644	1.59 KB	b661d1f81991eb229633393e9df2d9872ded4d4d8e17aca54c870e8fc035abb1
lib/rbbt/util/version.rb	100644	1.1 KB	7287dd8b2ee93ccad817e693695ea7e95d7d456d76d6e5463fd7deb11a0faae3
lib/rbbt/workflow.rb	100644	24.8 KB	f497df7c46721c48a607d3a52d4a5c81663b13ff5de995bbeeeff7f17659ab6e
lib/rbbt/workflow/accessor.rb	100644	7.02 KB	c83909d03d404344bc36620057ecbc2d6157c46fb70f68cff35dc2b73bfffa70
lib/rbbt/workflow/annotate.rb	100644	800 Bytes	c0c186b73e8894be2839b5843bcfc5b3b933e45057c476908ab1331253ebef70
lib/rbbt/workflow/definition.rb	100644	7.34 KB	720e4c4bcfc76c6dcf55be5a9c37e4843ddf5794a2cccb710e60a83dd4e0777a
lib/rbbt/workflow/dependencies.rb	100644	12.8 KB	683d7804826bd67217cd5611a05901a094fc6c2a7063bfa0c0eca5fe0d3fe309
lib/rbbt/workflow/doc.rb	100644	1.92 KB	9d55acf6a874fa3c6559cd2a1eb5c590bc47cc5a8bea29fad7928a211c43abf9
lib/rbbt/workflow/examples.rb	100644	1.5 KB	21d1807b72e71a7e4a5f3a9d878ab46399dff9897034af1a5b066542a85ae9c3
lib/rbbt/workflow/integration/ansible.rb	100644	1.51 KB	19ba6d0e12f0443aad0792a5750e628934f26892adcdd6cca8b3cdb120b18b1b
lib/rbbt/workflow/integration/ansible/workflow.rb	100644	1.54 KB	9a0971611899f9e85d4be3ccd77a45811ae1575ff5dab77821b4a25f7b1167fa
lib/rbbt/workflow/integration/cromwell.rb	100644	2.74 KB	890d9ee7dd9b738495736ef323173bd8624285720f8823816b51ceaabdb09bcf
lib/rbbt/workflow/integration/nextflow.rb	100644	3.21 KB	1c6e1572ce50d77482306e41294b2e010290099ef4a306a48ecb82e95b485322
lib/rbbt/workflow/remote_workflow.rb	100644	2.13 KB	dc833ecceff9c2105592185becdb566fc93b60f6084bdb6146ea03d445ee48cf
lib/rbbt/workflow/remote_workflow/driver.rb	100644	1.93 KB	df45707822d915c52e0f3b50afddd51e54af2fe9e00ca80ae70926a197810c2d
lib/rbbt/workflow/remote_workflow/driver/rest.rb	100644	8.18 KB	79699c868d4d73b17c5514ff63aab679beb221cc578fa7a59d7a1e66f3623cc0
lib/rbbt/workflow/remote_workflow/driver/ssh.rb	100644	11.1 KB	4ebfdd5bc18f305be9ff3fad35150065096e19e68b5f3cf83501b2fe9ab394b6
lib/rbbt/workflow/remote_workflow/remote_step.rb	100644	8.07 KB	9624350dde9f2d0564b66aad04262740f06da782b0813ecc0c1c0bb526db8f15
lib/rbbt/workflow/remote_workflow/remote_step/rest.rb	100644	4.34 KB	da8c6a1c27c71d054e2b6756086ea343ebb85d44555628a995e5a98658dfc282
lib/rbbt/workflow/remote_workflow/remote_step/ssh.rb	100644	3.38 KB	4fd543d97aed83b9c351b78733c942e82bfc0360c5584ec54da2cdc75455f452
lib/rbbt/workflow/soap.rb	100644	4.22 KB	e62cecc8a41d150f291df4a4d101d7fe2afd3a08840f921492cc687b8c7e1c51
lib/rbbt/workflow/step.rb	100644	9.06 KB	de91dd7ee767f7864cf76ba75dbd94738ea4a62533af6e8828cc19934ec71a7d
lib/rbbt/workflow/step/accessor.rb	100644	10.3 KB	620324fa64b42f50205d28336152f363af020985c7c88c2ba92a1df6685b8e04
lib/rbbt/workflow/step/dependencies.rb	100644	19.4 KB	7a73cb766b97630bca2ac30cc89d3e0a83cbc44d60b22667c77441a483446400
lib/rbbt/workflow/step/info.rb	100644	7.8 KB	a4b6f912073a0d4a91c0e685e70999c069ec15c7ef0312f6116bf22d6fca6b06
lib/rbbt/workflow/step/produce.rb	100644	844 Bytes	22f1fe438636fcc5bbc51b84c36face17761cb771d37dd32cea67192b1bdeca4
lib/rbbt/workflow/step/run.rb	100644	23.3 KB	181acf1fee0b848de7972ecaed16de0eae20e3ab03cc8ef9aa80b1ca4ce36249
lib/rbbt/workflow/step/save_load_inputs.rb	100644	10.2 KB	08f48303a1d42a9b4510e12f4095ee40ecf1d614458345cf108ef0731130f32f
lib/rbbt/workflow/step/status.rb	100644	4 KB	88e7f4c179cc53b760a32c404b1caf13d4427e6466c550de239096bda52e01b8
lib/rbbt/workflow/task.rb	100644	3.25 KB	06eb3b041751bdcd4baeb917d3efa7e2bde031b560898ee5b4ea7e9b9a03281e
lib/rbbt/workflow/usage.rb	100644	8.8 KB	faa4e1b2e27b6a9c249383858bacf2f79d62524a3684cae0bce9fc7b379a9883
lib/rbbt/workflow/util/archive.rb	100644	6.29 KB	9b966aeba61f51febde89c3f14454c35535f9f6f7cf8fd3339ae70be62887f05
lib/rbbt/workflow/util/data.rb	100644	5.34 KB	b28adcd6ee39546c61fb8e3be466ad5b4de846f7ac86583e5666bc88324ce199
lib/rbbt/workflow/util/orchestrator.rb	100644	7.3 KB	7b5fdaa023d846feea9d35c2d7a83b7946eee064c878698d647145f9133b1441
lib/rbbt/workflow/util/provenance.rb	100664	4.78 KB	0a8c3722619ac950ce47add8380edc4e1767dde96239f6ad95da80b780c1d42c
lib/rbbt/workflow/util/trace.rb	100644	6.83 KB	3510a24f4cdef4f311a3c09e895f8a464b3befbff36c8434429748f5c3f26b2b
python/rbbt.py	100644	2.41 KB	3b01ad1cca4f88e6633ca5ba165a97022ff259765f494702d9a169469b568c46
share/Rlib/plot.R	100644	1.71 KB	35939d4c76ab02758b09adcabaad8285d27acd21d3ab6cf5e21b0613f3259a70
share/Rlib/svg.R	100644	1.52 KB	83c22471572c21ee8b8abf144a747011edf8377061f0622d7c34fe5240497b0f
share/Rlib/util.R	100644	24.5 KB	6504bca7db9f803d6f30cba869dd4f2be1472cfade8ca46047955763da019e20
share/color/color_names	100644	8.82 KB	d32ece1471156bbdd059ffb148d82c035fd6ed8ebd3b05dab7b98f81c547b91d
share/color/diverging_colors.hex	100644	96 Bytes	47a2281fa409a0218b9818fa5b02bbc4bc0f704966dc3c7ca34b1ad89a9acbc9
share/config.ru	100644	2.16 KB	9b2cdf83bc9028620b97c06e00cc6d8fc6ba63ac550cfc2eea40c789baaad8ea
share/install/software/lib/install_helpers	100644	11.3 KB	816e2257ab260ccc269db31942b287753d3848fa2260be8fb906ac95df9bc578
share/rbbt_commands/alias	100755	456 Bytes	970bea358d9ad5b65b74f8da4b39b11ed17767ddbaa4369d50ecd57d99d21c95
share/rbbt_commands/ansible	100755	1.07 KB	767d0ced06188db439ef94df0fd558871f06c24d210350744fd4e2e02f73c9be
share/rbbt_commands/app/install	100755	653 Bytes	c6d660e0e2946530c21decb3390865c40dc45a29ee4ca5a182df447cd3875012
share/rbbt_commands/app/start	100755	3.34 KB	474c4fc7dd28cd3178d72318ca6ebe19ed5925333128b6b12a500ee6b94a7897
share/rbbt_commands/app/template	100755	2.2 KB	9969a3263c0c30cb8f83c33cb6147932216f8d732295cce81a6a9b4f87d78413
share/rbbt_commands/association/subset	100755	1.39 KB	4cc54fbdd5eadf97216db811d8f6e3d2888aadb934109368a452cf9a88ff2b31
share/rbbt_commands/benchmark/pthrough	100755	535 Bytes	29caf3ce53baceb27f9757e52af9f3218775380a8999d477ae03256bf76f6f8c
share/rbbt_commands/benchmark/throughput	100755	526 Bytes	0b4a087bec27589f04d52ca3669805172b71408c60651f9c9be96352d0923fa7
share/rbbt_commands/benchmark/tsv	100755	136 Bytes	a7b64bbd332416010285b93771d33af169be89c6ad447388f245447f0ec657c7
share/rbbt_commands/check_bgzf	100755	491 Bytes	e4e3a1940c678027d23860941f52ed46764c234be5f30c332ec3651da9024e64
share/rbbt_commands/cmd	100755	598 Bytes	2dc04c24754fba5ecafe622e16f7e49e38f4c9fe14a6b796f41ffce3962eec2d
share/rbbt_commands/color	100755	752 Bytes	38a4d800bcf68452edebe98f59ff066a89f048d9d9b3ad8bdff75642fdc783e5
share/rbbt_commands/conf/web_user/add	100755	1 KB	f53b6c643464cca98fbe5c47c966227052092d33456e7ace4b04d93f634e5c67
share/rbbt_commands/conf/web_user/list	100755	157 Bytes	6867cfddd60e8680a25cf3a1acdc24c1517e2a319188c7150b2187b23a9422ed
share/rbbt_commands/conf/web_user/remove	100755	283 Bytes	7290aa729be170211a7310e5719c0d4c53d76fd0eeafebda9b737a6e9daa5afa
share/rbbt_commands/file_server/add	100755	663 Bytes	84a321174d3bf3a67f7aae58a7aaf117324372ec1429ca11b9cdd47fc85aa155
share/rbbt_commands/file_server/list	100755	269 Bytes	75e36673d202a261943037e35ff7a23cd1eeaec2d5f07cf4ef20a6f1e8d921c9
share/rbbt_commands/file_server/remove	100755	244 Bytes	384f35e92475842f9c09db32e8bcf2d1c7f52800aa8c715f198b5381fc179294
share/rbbt_commands/hpc/clean	100775	6.72 KB	3fbdb1e81414cf16450c0b6939cc3a79e70a500e9b947df49c1c54e66db5b042
share/rbbt_commands/hpc/list	100775	13 KB	8610b62c45a657af2e25ee29c674f09066881d76dc72035ab7bde8522a5bf5e4
share/rbbt_commands/hpc/orchestrate	100755	2.68 KB	c4a6018241bcf9a7e89bf20d4b594134ab30863dd6ba6536929009517e3d1eeb
share/rbbt_commands/hpc/tail	100775	1.39 KB	eae0515bc326a1cc5bd4441954955ac8a92baa51be2cb3d06e3414cd9fc3c1b0
share/rbbt_commands/hpc/task	100755	2.32 KB	2240f1e6a7e23f801d25c54e7d58ec11986e7112349706ebaa887f89a0433e42
share/rbbt_commands/log	100755	1.43 KB	87e85e6910625161cb6279c372bd434d88245b2d154ee8111f949db4cb751e9f
share/rbbt_commands/lsf/clean	100775	6.72 KB	3fbdb1e81414cf16450c0b6939cc3a79e70a500e9b947df49c1c54e66db5b042
share/rbbt_commands/lsf/list	100775	13 KB	8610b62c45a657af2e25ee29c674f09066881d76dc72035ab7bde8522a5bf5e4
share/rbbt_commands/lsf/orchestrate	100755	2.68 KB	c4a6018241bcf9a7e89bf20d4b594134ab30863dd6ba6536929009517e3d1eeb
share/rbbt_commands/lsf/tail	100775	1.39 KB	eae0515bc326a1cc5bd4441954955ac8a92baa51be2cb3d06e3414cd9fc3c1b0
share/rbbt_commands/lsf/task	100755	2.32 KB	2240f1e6a7e23f801d25c54e7d58ec11986e7112349706ebaa887f89a0433e42
share/rbbt_commands/migrate	100755	778 Bytes	03dc1e39dd4ba032f981a25ff34b80f6b633b5d3fbc2b6dfb337f2bce7fff8b9
share/rbbt_commands/migrate_job	100755	833 Bytes	2ab4eefb03c611c0070530bd833f18a18d507477dc90ab91504669c476bb71cb
share/rbbt_commands/purge_job	100755	585 Bytes	53a6bf9bdcea77cc7c7f699453d918e6d51377bb3590c0b32c3ba1f85cdd4e1f
share/rbbt_commands/resource/exists	100755	1.29 KB	5ff7833bfd3a37dcad0e9b0bc592a01d15496b9ccae46af77f55d27e72d27d02
share/rbbt_commands/resource/find	100755	1.06 KB	1bafea06e18191a8dc42d1867c251cc9031a4e46a6d056e5beeacf5eccb6357d
share/rbbt_commands/resource/get	100755	1.11 KB	db5842a65f23e44703487cd6fac34c2403209311de7aae3414672e88a533ab87
share/rbbt_commands/resource/produce	100755	1.16 KB	70db068d987aab7d47eb826d81e523f940bb216a1999e9e7b2b0dffae15c91c1
share/rbbt_commands/resource/read	100755	1.11 KB	e3704a10bb8ddca4c1d1495f364bf3d7431493a1837c5882b0f3cbee0c36c1c8
share/rbbt_commands/rsync	100755	1.15 KB	ead8b9b15664d46bf90c8632aecf3856548f14de31d8f4df9388b3c1c9c950dd
share/rbbt_commands/slurm/clean	100775	6.72 KB	3fbdb1e81414cf16450c0b6939cc3a79e70a500e9b947df49c1c54e66db5b042
share/rbbt_commands/slurm/list	100775	13 KB	8610b62c45a657af2e25ee29c674f09066881d76dc72035ab7bde8522a5bf5e4
share/rbbt_commands/slurm/orchestrate	100755	2.68 KB	c4a6018241bcf9a7e89bf20d4b594134ab30863dd6ba6536929009517e3d1eeb
share/rbbt_commands/slurm/tail	100775	1.39 KB	eae0515bc326a1cc5bd4441954955ac8a92baa51be2cb3d06e3414cd9fc3c1b0
share/rbbt_commands/slurm/task	100755	2.32 KB	2240f1e6a7e23f801d25c54e7d58ec11986e7112349706ebaa887f89a0433e42
share/rbbt_commands/stat/abs	100755	1019 Bytes	acf6bed2810a81c9152e35d0385065a1e526566d8acff8dcd469a101810e8929
share/rbbt_commands/stat/boxplot	100755	1.18 KB	41fd85b2a2e1d2967e437db3050bbad34580d4727b7f8bf2f235a47b614684d9
share/rbbt_commands/stat/compare_lists	100755	1.08 KB	59d54194577ad6024710d144fb23ef8d5d13f017b792c0d86c285dae415e63f6
share/rbbt_commands/stat/density	100755	1009 Bytes	781d558d94f2903902a09a4214b0473b8eec87e381842e75cb9cfd81c6040fc5
share/rbbt_commands/stat/heatmap	100755	1.34 KB	0df66a0bf6e27e461e76a9240fff9f352194be4b984c08310eccf1ea41a08b5d
share/rbbt_commands/stat/log	100755	1021 Bytes	976845ce8a03793fbac0340d4ac16557e90f8ddcf5f565ab1d9a6a72426d9021
share/rbbt_commands/stat/pvalue.qqplot	100755	1.3 KB	8936b80d9c3f2aace40c1b1a66a2bc89cce5fa4375ebdb4939240ea9597e238c
share/rbbt_commands/study/maf2study	100755	1.57 KB	7dea86c264b4bf6893b174c27ed0377219ed67c3c709fd2fbc7a039978abfe23
share/rbbt_commands/study/task	100755	5.04 KB	82fbb13d33323a8568aa4c722b45e77c258ec4c459c3e3c0d14ab8c2f04af6b6
share/rbbt_commands/system/clean	100755	3.49 KB	01a8c801a76e4fd67b01daafde92ab246b9609c02886d783bdab7f1d634e4435
share/rbbt_commands/system/deleted_files	100755	1.08 KB	e462ce3094a0ca9ad7131616fbfad737f3f222bc3efc2790623b47eb98f59aef
share/rbbt_commands/system/optimize	100755	2.41 KB	ceaadbc9721a0c7f0eb451e6f540b37da84fddfef252d8f37454f79d9f280b7f
share/rbbt_commands/system/purge	100755	695 Bytes	f815871c27477c14a796b97e6644ad65fef129a8bd7e00ed932759be725cbd7e
share/rbbt_commands/system/report	100755	2.13 KB	e30e21deacc461727cfb11f5550397e9c7a7aa36f503254727624e0a557f889a
share/rbbt_commands/system/status	100755	5.88 KB	471b02af8ed8abf2423edbd8422d4fa6daaf6d0bc9ec59ff796b8ef559a6a3d0
share/rbbt_commands/tsv/assemble_pdf_table	100755	1.81 KB	93f925be0299682e02a417efefd157fec77c06e7121bcaf874ac40c68314debb
share/rbbt_commands/tsv/attach	100755	1.17 KB	9321b1e7fa79e9e5ce4620d0165ac41c2bbcbde5240a50dbf1d0edcd26540e79
share/rbbt_commands/tsv/change_id	100755	1.11 KB	84008866993f8881f3073f75787de8683ff3af6080b14f41d176a7cd179307eb
share/rbbt_commands/tsv/collapse	100755	491 Bytes	a61bb53b61718dce45524af4083ac7c594c670c134253a53322828c0b02e9f93
share/rbbt_commands/tsv/get	100755	2.26 KB	9ddbcb0d37fc081e7ce4c7e7a12f8898a839d03dc5e07e699a6bc0bc67265d84
share/rbbt_commands/tsv/head	100755	1.02 KB	03e8fefcec76689454aa917237d0ba8485833bda65df3498f9493c7229a20b84
share/rbbt_commands/tsv/info	100755	2.42 KB	100420f6c929e1f63eb900ae2eb56ce068a707ef432a7ef7d5e53d2e0cc82ef6
share/rbbt_commands/tsv/json	100755	750 Bytes	0a006158689728e224ccd0b6d2dfc1fa0e972140bceaf19f4ec1674d7c4fcd27
share/rbbt_commands/tsv/keys	100755	1.17 KB	eec19b5f3e1f40b34ae3d91a17a0f6ba72fa8befd75b547533012bd6e7777edb
share/rbbt_commands/tsv/query	100755	1.6 KB	be623f360686b13f49d3d00c9472795447650d5164149b483d81a1cfa888076d
share/rbbt_commands/tsv/read	100755	1.69 KB	1075cadd8495939ee25f22a8e0871e25cd44b58207760caaea700b095bbd6679
share/rbbt_commands/tsv/read_excel	100755	991 Bytes	6c4d1dce3915f4e7ba8a018a24ebb49c023845a5d8f64cd57015990f81de3063
share/rbbt_commands/tsv/select	100755	1.33 KB	47b47763a40f6fd664019efc16741a6c4bf668b888199b09d172bf554943b426
share/rbbt_commands/tsv/slice	100755	1.41 KB	fa7d591cafdc6224477efa115c3ff0fd3caa5bec94096d9e131bf7e86997b605
share/rbbt_commands/tsv/sort	100755	1.42 KB	222cd1a1526e52e605ff4a7b426e3442f1a43540b1c3f3866d1b3f6d061d69bb
share/rbbt_commands/tsv/subset	100755	1.36 KB	09261befd6c586ad51ab66ab36ade46a6d91e97669d2c393819e9fa8798ced17
share/rbbt_commands/tsv/transpose	100755	1.11 KB	221598672df9c556fd9e94fd8c7a0eaacddc3079d7c3341dad54be1aebe477f4
share/rbbt_commands/tsv/uncollapse	100755	499 Bytes	21ef0a1d320491fdd06a653b7d2028cfcf625fcc901ccf8661a093d82472918f
share/rbbt_commands/tsv/unzip	100755	1.12 KB	0d98fa59179820236c3cca372e09cb9e5c797fd445ea4af545a853de4c604cae
share/rbbt_commands/tsv/values	100755	1.13 KB	8d6b5f4eb02f6ba09936a3a5ddf1b79b4d95e6fdff0aa83e405a32cf81d79ca9
share/rbbt_commands/tsv/view	100755	1.53 KB	472518b3bf317b8a9c21ea2f84020c11c3ccee003e4e6678e4fbd4236ffe19f9
share/rbbt_commands/tsv/write_excel	100755	1.32 KB	0418c1489ee5cbedcbcddf3d5e7df155f50ec1c131901fac39f60b3623bdcbf3
share/rbbt_commands/tsv/zip	100755	1.13 KB	1417b42ce8d93ed7e63fec3cafb9df0b1ffe53bba8755c0e5ce05802f91077d7
share/rbbt_commands/watch	100755	622 Bytes	c1629ba7e1c06693a25e66b398d40fc192ec6a8380e9257fd7a6bde6349a5ac6
share/rbbt_commands/workflow/archive	100755	657 Bytes	4997afc4aa28788253839c25410b1ccf0f13d82155c9bddb79a9f47a6ef7a881
share/rbbt_commands/workflow/archive_all	100775	762 Bytes	b8dda551c11a173103aaa590ca9b8853c1795865ae1477dafcba0bb819d8c345
share/rbbt_commands/workflow/cmd	100755	2.13 KB	7f35cf92cf2bd4a3e5844ca35aff12d26d9bbfe7cf491ab42c8eafc6f73ace89
share/rbbt_commands/workflow/example	100755	3.01 KB	311332c97ae371a5e2c26d4391a8767f3fcd776491d19df94f6638598c8ce8dd
share/rbbt_commands/workflow/forget_deps	100755	1.41 KB	5c0acf303cb5ef4c89cf8c72e46739ce5c26dd99b66d685188965467f1b453bf
share/rbbt_commands/workflow/info	100755	5 KB	09a6eb8296df80269c06ea828566711d73d9c7f98c95001a61c2cf6269b45cff
share/rbbt_commands/workflow/init	100755	941 Bytes	9e4dd1d96169ac8263be270fcfb7c3b0a8e0cd837c482a1691fa58b5680a3544
share/rbbt_commands/workflow/install	100755	2.98 KB	92e13f22f8de67def4c8aa878f4fefbfad14b6ed3418ce23135259db60eafb66
share/rbbt_commands/workflow/jobs	100755	327 Bytes	917791095ed20880d29e79cc9ade70cb8d04da141894a686f71a0809cd095b8e
share/rbbt_commands/workflow/knowledge_base	100755	2.4 KB	82f8807491e6626ff5b20230072e9f70f0572437b1ad524a8ad934cdf3c40092
share/rbbt_commands/workflow/list	100775	799 Bytes	f97cea2888c599e646ceb98f652765ff67fd00bacdfae813abd7b6829b39ca44
share/rbbt_commands/workflow/monitor	100755	3.5 KB	ab8002a5b21b314e16573cb3881806b379e7f35fbbc76b87936364f65e2377b7
share/rbbt_commands/workflow/prov	100775	3.56 KB	1676e80133d94f2f5b49bf58b148d3cc13ad7105f3c40ef84de7ae22e31f8c2b
share/rbbt_commands/workflow/remote/add	100755	738 Bytes	f4b49e684175617376975adc83c75d085f970a459625e93ee8a983d229e40a68
share/rbbt_commands/workflow/remote/list	100755	207 Bytes	84ac4927b2c59e57674fc96d4eea1bd61ae6714bd4ed1f0cdfab154711a2818d
share/rbbt_commands/workflow/remote/remove	100755	257 Bytes	fc7d08f44bf96a230a2e359f08c24599a6ab8490b0ace7f552a1c8af93c40bef
share/rbbt_commands/workflow/server	100755	5.17 KB	f1649057b6f1654e2b1af8c67630c87441a5618593e897e603b4d85b15798b59
share/rbbt_commands/workflow/task	100755	19.4 KB	d9a93a582df8020f298f9238cd3b4d965af04e78325837118d79bec03212f708
share/rbbt_commands/workflow/trace	100755	1.03 KB	b10dc441071636179320eef5a861b314bde6bf68f059a2472db1af5c6164b3c3
share/rbbt_commands/workflow/write_info	100755	1.66 KB	272a5a2e74d199ddefc9731355d157759f050b6c75cfe0d41047473eb0089d00
share/unicorn.rb	100644	323 Bytes	4e3239784d6f1a6719af0692ddb7e21a73aac0d16ca4d572d6f15533fda08d3b
share/workflow_config.ru	100644	3.56 KB	56f42cdc24857a64b51db1172879f8c2696323b6d78e22c36a635dfafe715b1b
test/rbbt/annotations/test_util.rb	100644	1.07 KB	f6738f8bd6b3f26e1f607ce945d95cf2d0868746353134678ab3609ca73335c8
test/rbbt/association/test_database.rb	100644	2.88 KB	8587e50d661cc96d9765af36ddec9b597e912464055c795977516efd4fd57719
test/rbbt/association/test_index.rb	100644	5.24 KB	d11097f7202c3c54fd3843d71d0dee00bef5a521f1a861fc6daccfc78a0409ae
test/rbbt/association/test_item.rb	100644	527 Bytes	30796620f926dacc0bd5b45b5bcf1e68642d3af937cedf9015f8a9e6cb223182
test/rbbt/association/test_open.rb	100644	2.22 KB	dfe3873444907d43367531793ff9fbc0491921f7a2b32fd4682762bf8158400c
test/rbbt/association/test_util.rb	100644	4.56 KB	df62800b97e77f3850c130f7e05332d0f99066a8de254d25a0aab08b28bdc722
test/rbbt/entity/test_identifiers.rb	100644	2.56 KB	eb11f5ffd5d53cb688fec396e77b0cd51dbb0edec969792e80dde99fd8b44003
test/rbbt/hpc/orchestrate/test_batches.rb	100644	2.24 KB	f48e246391b0d648dc27a6850eed2d04ff4928e33cd3bc3093ca6ee5158c9afc
test/rbbt/hpc/orchestrate/test_chains.rb	100644	3.49 KB	3501c5487c1ff96925e397d1c82c37e5e54a52249520459c306aef4aca1a7fdc
test/rbbt/hpc/orchestrate/test_rules.rb	100644	1.8 KB	5e10ce970ffa008a87c74ff2d4a3e9130aeab6e85c5f05e1d5710cfd8470ca58
test/rbbt/hpc/test_batch.rb	100644	1.68 KB	01ab5bd3b38bf90a96cbced4f95e55b37e1da4ff448fc15e62610ec4edcb7f80
test/rbbt/hpc/test_orchestrate.rb	100644	3.13 KB	1a858f74481459669c5db6ed591385b5cb2f0e2bce098d1a4ac4c52bb21ec6a5
test/rbbt/hpc/test_slurm.rb	100644	894 Bytes	c9dbc0fab41e14b6a32adb2e0c72bedacdff130c418b4d3f01bdcf71526f6764
test/rbbt/knowledge_base/test_enrichment.rb	100644	1.77 KB	ce89ab47ef2e5c803e048a81b8ed8ef89745d0f13c786afc5ac49856e9bcff53
test/rbbt/knowledge_base/test_entity.rb	100644	1.1 KB	4d5e44db00008570d85b38d67d6ad109c28c4a302e497f61f77e44d874b72a75
test/rbbt/knowledge_base/test_query.rb	100644	1.32 KB	b6181d50442d35c650c78416401e9cf8bb503e7e85f6758abc6a6fc0a3ac42f2
test/rbbt/knowledge_base/test_registry.rb	100644	3.19 KB	a5e8cedda6d1fa51d0fd83aed2f8381779276e9f1893e940a9d726c2a0abfe05
test/rbbt/knowledge_base/test_syndicate.rb	100644	1.63 KB	541f1f0cc0a2059349639428f390401cc27cf44611170b133700011e8960efa4
test/rbbt/knowledge_base/test_traverse.rb	100644	1.73 KB	24935c3a3557428e28b631b1c11552d304131ed4bbb5fd6b28e5e7f0ce8b7fa6
test/rbbt/persist/test_tsv.rb	100644	2.1 KB	3313b32fc7ab9a1a19dfacf17359cd98a8df51c17c7a3ee3cdf95be3c89ecf7d
test/rbbt/persist/tsv/test_cdb.rb	100644	643 Bytes	76fee800e15f4b62075f701c0636e7e6fdcd3db24fab10b85ae6ef9aa56ee343
test/rbbt/persist/tsv/test_kyotocabinet.rb	100644	1.03 KB	add276fe3efb701b39a21d52141d3cc1966626be114abf5860d60f86a917c8e5
test/rbbt/persist/tsv/test_leveldb.rb	100644	650 Bytes	92a599c22e75eb086e991a6ee92beef0c39ceb1fb36de6d12a3860ae2942fd85
test/rbbt/persist/tsv/test_lmdb.rb	100644	639 Bytes	6a2b7ec670bbd63d4147b6fcd41c7ad561aa74831d1b3bec2ffb035d2aef3881
test/rbbt/persist/tsv/test_sharder.rb	100644	4.59 KB	9ad5e5e612062b54da0a65191c7b5f52f649bd75b090934a1a86aff86d871fd6
test/rbbt/persist/tsv/test_tokyocabinet.rb	100644	9.07 KB	6a28e0cd31dfc80eec8d91f240be5b785115a2f60b99b693943da02604972797
test/rbbt/resource/test_path.rb	100644	1.8 KB	a0109078bea3eb4ee91e6eb5306626138aded820ca8a1da5c3f3f510a4916a5d
test/rbbt/test_annotations.rb	100644	5.21 KB	25e61438b3e909d29b49427943f42d6e3323146d1971e0e99e4c770ddd651377
test/rbbt/test_association.rb	100644	3.5 KB	cc5f1a12a341e504f5abe64f14ae6cf022b6f620ad02818979dc42d1dab585ca
test/rbbt/test_entity.rb	100644	6.1 KB	26c4ec248d92fc969d36ac05320c4e55b5f47525d3cbb7dde29b9f81a339975b
test/rbbt/test_fix_width_table.rb	100644	2.94 KB	2ada94e42b6e20f96bda7721d8a24d0459e0764a44c12973b99d4ab86d437fa0
test/rbbt/test_hpc.rb	100644	355 Bytes	c5ccbeda26bd17f5960d32a03569fade9e8aad9460cd81872d5a173c8c314f18
test/rbbt/test_knowledge_base.rb	100644	4.17 KB	baaa1e17fd685c67f1c1c1d50c91fc64966587098282fcad62e675dbafe50cce
test/rbbt/test_monitor.rb	100644	231 Bytes	884eb20d716c0472756eb3fbd953ba4e785a6c4ac84a75a0fb930059bc6e7b2e
test/rbbt/test_packed_index.rb	100644	1.53 KB	2f2b441355a1655ed9521bb7c66fe7ad551cd77ebca663090add62af4d722e94
test/rbbt/test_persist.rb	100644	1.95 KB	e47cc24cf4b93f87ec6e93c06119c197adc3d6facb2d65f14a74ba4251e353dd
test/rbbt/test_resource.rb	100644	3.13 KB	f93985420b7c073f57fea301f3e930aa544cd576eec08831a24371ab203c9785
test/rbbt/test_tsv.rb	100644	15.5 KB	25c4415abb55576cf720022c57978155eeb479178cf29b1878abaa73bd645764
test/rbbt/test_workflow.rb	100644	15.4 KB	f4771cc9090b30163b64fb62aa3db2e7a5c79afbd4b8819d9c860fcba55710d6
test/rbbt/tsv/parallel/test_through.rb	100644	928 Bytes	0338554dd1ee446fbb1ab38567007cf0e141f69461b2a7f5fc9c435931c7c86d
test/rbbt/tsv/parallel/test_traverse.rb	100644	10.1 KB	2199c62b1af60720eb83cb8c32974d384941cb99e1e5021c168002512caf961b
test/rbbt/tsv/test_accessor.rb	100644	6.87 KB	6e3a2301706d3b3a43256830735180ddc18319159e7263e7f256e01de5a7ca8d
test/rbbt/tsv/test_attach.rb	100644	15.9 KB	4a1d71484b4b79f735ac7dcdf29e8bdc641167110f242ce95c035d95730a8c5b
test/rbbt/tsv/test_change_id.rb	100644	1.1 KB	ccc2e6b9d292d956a6fd8b7c1990ff021879abf90859aab452276d91df62259b
test/rbbt/tsv/test_csv.rb	100644	861 Bytes	75a86f58b50814852ed886e208794f9ea8aa694988385ac437e13c52430383e4
test/rbbt/tsv/test_excel.rb	100644	4.98 KB	49e007195b00e77cf5e8c931d5010687857b4b91712a9cb7ffa7e3c745c975e2
test/rbbt/tsv/test_field_index.rb	100644	522 Bytes	6c18b11f1898c03dfd81f75330e913d93e15c3b167c26d0d65b898691ad97d20
test/rbbt/tsv/test_filter.rb	100644	4.21 KB	8ab4193fb9d57c5bdcf2b72259754d588e429de04701ff3d2b0c4bb631cb176c
test/rbbt/tsv/test_index.rb	100644	8.09 KB	1e871d3f8aba22957e47d82a5aedc16299cd622fda564001822df710f256dc88
test/rbbt/tsv/test_manipulate.rb	100644	7.94 KB	276bd4463b542e96b90ac1059308342d453e3e3bfb42d91e312f8093549f0101
test/rbbt/tsv/test_marshal.rb	100644	648 Bytes	f5fecac52c23f1e9782f8e8f706c5139985f964636acb692b6a18103bedd9f63
test/rbbt/tsv/test_matrix.rb	100644	451 Bytes	58bb2a57cf82958f2d56a372bfe780566f83d0077e43131781cd5c23cbc4dc5e
test/rbbt/tsv/test_parallel.rb	100644	185 Bytes	90f840c4c7767283e6c40820b83eb2cbcad4adeafd50e5b75540a9cfbba04b56
test/rbbt/tsv/test_parser.rb	100644	1.82 KB	d1a99660b2ba3db831c4c2888fe9a1e7e1da406309a54b210616ca7b5d8e22a1
test/rbbt/tsv/test_stream.rb	100644	5.26 KB	e2fedb146c3197e7e5a453c172162ca348f09a307fcb2e6db310a80064a1f4b6
test/rbbt/tsv/test_util.rb	100644	991 Bytes	f301db511c171a0e8e2ae8c0ce016d3344b19b8b0935faa2164c087318cbff13
test/rbbt/util/R/test_eval.rb	100644	802 Bytes	2b1a1bd1bf1f93d1a78eaa40277b353e738164bca0f55eeb7c9ece124476845f
test/rbbt/util/R/test_model.rb	100644	3.67 KB	11e295dbc6f705ef7192fbad25eaf64fa358449009aaf14860c7a97b683a7258
test/rbbt/util/R/test_plot.rb	100644	885 Bytes	69cb3b683b238a462a8699c0cc011c6571f5c293dea81a12c199cd9c10112a97
test/rbbt/util/concurrency/processes/test_socket.rb	100644	1.46 KB	865da04452a97d7b0fa6dc4271c26bc3e499ca944fffece738357f90391ae71e
test/rbbt/util/concurrency/test_processes.rb	100644	2.89 KB	d8710d781d9e0099e2d72575bd96ac880c572bbf276b0b0d3d8d9e822f627349
test/rbbt/util/concurrency/test_threads.rb	100644	747 Bytes	8988c9bc405040a1338dbea9fed8e3069449d137ed7fe71150e29956d10075a7
test/rbbt/util/log/test_progress.rb	100644	2.21 KB	ece38ed3bbdcc664b8d635a55fe306a5827e2cc91784f162506504ed2462ea5e
test/rbbt/util/misc/test_bgzf.rb	100644	1.2 KB	32665a1ce8e58db469560efeb0ab725d5e3f4b72208dbfc38f5620ce97de3c3e
test/rbbt/util/misc/test_communication.rb	100644	330 Bytes	d8e52a1098bc6a0c137ca6291386c548fff97d80dd1bb33d622be123f4c3c214
test/rbbt/util/misc/test_development.rb	100644	493 Bytes	25565eb12bbe8387065ddb25644cab778f373c5945bfd2b51bf9628c205c261d
test/rbbt/util/misc/test_format.rb	100644	246 Bytes	1020b2e1d905d8f3fe41a1d2306eda92bdba6c2b92f365116a8b3f692281e4ba
test/rbbt/util/misc/test_lock.rb	100755	1.68 KB	da1d240aed0782c6fc108a3ac6896525eb41a32d8b101abcc78c68beba8d6724
test/rbbt/util/misc/test_multipart_payload.rb	100644	4.52 KB	e7d6758d778b0999703021298a6484f6e6e13f46b9d94b27fb19ce1a6c4b8bfc
test/rbbt/util/misc/test_omics.rb	100644	6.11 KB	eafcada77e215b1f774cfb808f1c7dc62e495aa843bb9ba858fc2d07165aaebf
test/rbbt/util/misc/test_pipes.rb	100644	6.8 KB	1ce03222c19827cd60558be4701ac9a44d62f07397971cefd3fc9b124146fb3d
test/rbbt/util/misc/test_serialize.rb	100664	592 Bytes	f1b5902d9bbc3619fac77f717450d59772e2ff165b0a3b4a573425663045b34a
test/rbbt/util/python/test_util.rb	100644	656 Bytes	389314c5cf289f820c07c684d4d34e77a3cc13f99670f4b70069e6e77329d43d
test/rbbt/util/simpleopt/test_get.rb	100644	375 Bytes	087fa04891d1b5b15972439390b23fb41c9bf68abb09063548d9a43f372b4516
test/rbbt/util/simpleopt/test_parse.rb	100644	290 Bytes	a6dadd1f7a2ea12e2e54126f1caba826afe68a97f28e3dcceb60be288a733667
test/rbbt/util/simpleopt/test_setup.rb	100644	1.33 KB	bd09fa06f29d87cdd838d51552955a8a426536102b856a116469bf9450e18877
test/rbbt/util/test_R.rb	100644	887 Bytes	7b55545b629fb1797e016f0fdb4cdef288d37a6501d67a62b949b0c27ab37d6f
test/rbbt/util/test_chain_methods.rb	100644	531 Bytes	06dc8f5607ec076d9f72eee143cdfb85f9c7ea3842402a9a0d29c32cfce0e0f3
test/rbbt/util/test_cmd.rb	100644	2.79 KB	30154845e6be3fea5760d58fd56dcb3583abaf5f282144d1e4b05455549a6f91
test/rbbt/util/test_colorize.rb	100644	592 Bytes	fc4e693ee1e1590967b77af0290aa0c313a8d5e676d1338c60c94b1da6829dab
test/rbbt/util/test_concurrency.rb	100644	170 Bytes	44947dbaa22e441e87c07afa8c81eef3cc84ca8b3e86a9b049baaabfe7b6885d
test/rbbt/util/test_config.rb	100644	2.42 KB	0dfe8852e060683c359cee4c1ece0a6923866f063734f85403e51d81de58d5f3
test/rbbt/util/test_excel2tsv.rb	100644	277 Bytes	0f37a188e34690734f81a7f8e3d584cb90e1ac762c02b5785f018caff0142bb3
test/rbbt/util/test_filecache.rb	100644	850 Bytes	c29be77120ff49e5e29629aa7d4ce84df4f7955f5755c0d746fe6988504a7aac
test/rbbt/util/test_log.rb	100644	1.14 KB	9398307e0231fe62d51d2f54cbe15c49a8e8b840c2b25b1c439e56815eac3359
test/rbbt/util/test_migrate.rb	100644	1.19 KB	734b5215ebfdec568124eb172edd54556e757be2703e713870b013b2a38ed577
test/rbbt/util/test_misc.rb	100644	20 KB	4352941ec97fc5048b664e59f79b852c30e3a11e956b603fc87736fb2945ee85
test/rbbt/util/test_open.rb	100644	4.24 KB	c085553592cb4ee068fe64c97dfe00bf9b3fb6cf2580b83b17c91c732de2e7b1
test/rbbt/util/test_procpath.rb	100644	612 Bytes	b4bfdaa2106764130f91b398ad9d67d008db8b5b92c0619699ef5a4ffa995f18
test/rbbt/util/test_python.rb	100644	2.93 KB	8b47668cf06cc80eddeb2235cd95475eb6850153a42855d6f549afc0b79ca6a5
test/rbbt/util/test_semaphore.rb	100644	859 Bytes	2f1c2d06fe7a0157901d53d3ddd670224da72bf46655cce10dd10f6690aace5c
test/rbbt/util/test_simpleDSL.rb	100644	1.1 KB	6a1abadff324b8313016a93bb48406461df7bd16c88986f42d0e0c8488ed5fb7
test/rbbt/util/test_simpleopt.rb	100644	298 Bytes	008e9e0ebabfb5c0b344cf28b3fc6c4222368c8061698798fb1d70c33ad27396
test/rbbt/util/test_tmpfile.rb	100644	677 Bytes	47389676e34f90c3deceb2e39c6831c926672a6b24593c49e01827b0776e1308
test/rbbt/workflow/step/test_dependencies.rb	100644	7.51 KB	d2bd7ca5e2a1e7d3acea69966ff8011b0b7760415fb3feaa5b6ba78be9c73b36
test/rbbt/workflow/step/test_save_load_inputs.rb	100644	3.96 KB	2eb6f485f0e141a9e1e4990cd5d1f80c19b3b5abf8fa82d2d7658462badfdc0d
test/rbbt/workflow/test_doc.rb	100644	411 Bytes	205df6db83bcad1429df1cf02cec6b4415bd10401871a07dd65e05e179e86a0d
test/rbbt/workflow/test_remote_workflow.rb	100644	2.76 KB	19dcf14f7c94cf0bfd5f9690a08b3296f66a82f456e877ccbaea56f25a859b12
test/rbbt/workflow/test_schedule.rb	100644	0 Bytes	e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855
test/rbbt/workflow/test_step.rb	100644	5.67 KB	c23984a2e2c6b825dfa5a2e6213533438a249bfe794eee46298f4ffa918110fb
test/rbbt/workflow/test_task.rb	100644	2.29 KB	f9f4d00529419f478db041ed71734793bb5138b33712ff400a8df4374af36c08
test/rbbt/workflow/util/test_archive.rb	100644	743 Bytes	d771b8b3369e48e23f35d0a7023224e9fbb3b600e3b4488d5117f57aca750a2c
test/rbbt/workflow/util/test_data.rb	100644	1.88 KB	8a2e128b5edbdde4c0902a9fbf816aa40c044efb03d874d70c47e3ea1dc2ce00
test/rbbt/workflow/util/test_orchestrator.rb	100644	5.76 KB	e8c205563cfbb213cd76f9a6bb41034a3bebb78b4eb7ffe43ac1b55459bb1f08
test/test_helper.rb	100644	2.2 KB	b939cacfc1109b666c9fd0c389d2d0372f2dd8bf9b87110d7401a3553c3e75dc