viral_seq-1.1.1

https://rubygems.org

id: 1260386

number: 1.1.1

platform: ruby

spec_sha256: b3c9cb30132f28cd4917185872da544753b8f5dfbc3f90d652fb4976635a5793

sha256: ee93209a7c1d8982b43b62123364b7e9995e59de6fa84f281fb44f5100bef9ea

created_at: 2024-05-13 08:33:03 UTC

updated_at: 2024-06-13 12:27:21 UTC

position: 26

version_data_entries_count: 36

uploaded_at: 2021-04-01 23:42:37 UTC

indexed: true

has_extensions:

extensions:

Gem size: 3.46 MB

Version Data Entries

Total: 36

Unpacked size: 3.71 MB

Full Name	Mode	Size	SHA
lib/viral_seq/pid.rb	100644	719 Bytes	82f3aa9f947f9819d277fff83a04c962c560ca5b7f90dad9ae0740f2ba0919e8
.gitignore	100644	126 Bytes	9c48cae9c5e128d1fed12a2552ecf7eae1dee732621a945fa3172ca0743dba66
.rspec	100644	53 Bytes	06245e25d7cf46b4fbde27b5faa0df0d4110e11918eeb5848de4ab2aff897b59
.travis.yml	100644	106 Bytes	fe5db550d8498ffaf0658bd23dded2117b24ff893cb54d71bb1d69185feca411
CODE_OF_CONDUCT.md	100644	3.15 KB	4e063fbaa9876b3b52cd5c5357ec6ae25a7f28bda9670489393b1e8da7f09673
Gemfile	100644	94 Bytes	32c7f1953f2a15b48d7e360ca45b879409c5fa8a2eebeec809ea6c7782dedce1
Gemfile.lock	100644	721 Bytes	64c9886394c88f3b2b77caf1127214883faa9e4fc86482b01f978c5bff7dafe4
LICENSE.txt	100644	1.08 KB	7aa7a19a7f5deba9efaaa6b1211af1ab9bbc08937f00209f9846213c16f02129
README.md	100644	8.2 KB	b53263e154d6dd57e2876338571aca207f75378b80b839c1a0fca24d26b8c02c
Rakefile	100644	117 Bytes	dca0f4190a3b018ccfd644daa6600f4fe5d11b3330ecb4c564a2971465e5b016
bin/locator	100755	3.51 KB	f934a958489109ad3e49eca062fc0214ed394226263e6ac8b42b2ff6c3a8c0b9
bin/tcs	100755	16.7 KB	c722a46c9da51a0b0370c3821a6e9a81ea57c7dfcadd1a2927f83326d030ce0f
bin/tcs_log	100755	2.98 KB	44d961287171f9310679629196ec972c9b660734d42f68eb1c562d4e8d722624
docs/assets/img/cover.jpg	100644	1.08 MB	340f94e73e9491560f06f13712df050b54e74bee85a0ed43e02ac9c6c6fc9bd8
docs/dr.json	100644	1.88 KB	140fb16b5462c05fe3370a77486ee3c1020a8db254491070dbaf34689d965cf9
docs/sample_miseq_data/hivdr_control/r1.fastq.gz	100644	1.1 MB	a60e0592621b92ae49c31cbdae72d25a1c411ec55aa38ddd492433e93648f257
docs/sample_miseq_data/hivdr_control/r2.fastq.gz	100644	1.33 MB	e488771ba6cbee7f540611a15fe4e80010a18efd0f7b512962e88af8c4039de8
lib/viral_seq.rb	100644	1.77 KB	1bcf8925483581cd652b5e8ff7fd2caf488fbcc681d95820fd77b27b339ef20e
lib/viral_seq/constant.rb	100644	278 Bytes	7782368418baa6f410bbceb207e6fc6ab3fcee167b9502d1a5224f670bf24f81
lib/viral_seq/enumerable.rb	100644	3.21 KB	59aaac6421054f3a1b0886673cdde68bdfe5c6e6c5cc0b395d24c25eda681953
lib/viral_seq/hash.rb	100644	1.33 KB	e71a962945bc24a01660b4e76fc350471bf75b0d5fa41d7c1e43bb5142bca673
lib/viral_seq/hivdr.rb	100644	22.1 KB	afc4610abd0af4dbc3842f0fd6b0ec42688d40ca0e9bbd38a1d5b584e89479d6
lib/viral_seq/math.rb	100644	5.73 KB	1eb2093a9f12b31d6cbb83fc3b8f7a61b341521d75209364d0efe68013f410c5
lib/viral_seq/muscle.rb	100644	2.38 KB	70304b3e59b8f39f8888bf7329951b4d198933cd2bb3ca8bce6232fa9238706d
lib/viral_seq/ref_seq.rb	100644	30.5 KB	8138f40402fddf1747c91c6f0ff0fd69aea3372da588dd7dfbe2052b55e7eaa0
lib/viral_seq/rubystats.rb	100644	4.06 KB	59edd9a885b04b7481f15e3896dfe73a0f48835cd6a0bd9576ed212e0e99c703
lib/viral_seq/sdrm.rb	100644	642 Bytes	f6bae5940c93efe1c8ebbefcb4866e40371d873fa8917ac5ba60b3ada2d2e635
lib/viral_seq/seq_hash.rb	100644	42.6 KB	b32e51bd5040d16672a1892b6c38dc40e720c5b2a92c5618dfc85ddd7cb62c1d
lib/viral_seq/seq_hash_pair.rb	100644	9.76 KB	dbac73e7bd628dbb295ae462d041a234fcd693c37a419e743aaf5c79c7ece750
lib/viral_seq/sequence.rb	100644	19.7 KB	d36be7ca95e79bb34544426d92fdf5830c85bde813a52915ebae2f1c5f245960
lib/viral_seq/string.rb	100644	3.03 KB	cb48a71e40658d61ae13187b8e62359536e6a1f4e5a4814c1356ba301bd2e5d4
lib/viral_seq/tcs_core.rb	100644	10.4 KB	5370df15febe21916f19e3167dacdbd70532b191ac7f6a9d2476907bf517a090
lib/viral_seq/tcs_dr.rb	100644	2.64 KB	6ca7d38866855f5930bd165f1a9270f3a85bdbc3e968781782fe38d08bb4ba8f
lib/viral_seq/tcs_json.rb	100644	6.79 KB	594b647f37ad42678b3b6212d1b86cb497c529f1304f0fa20fbe5f5401fc2681
lib/viral_seq/version.rb	100644	109 Bytes	c1e89f7881c7a47bc5d6ea35602d2d29884f095af7e4b2bd033034a86cc32863
viral_seq.gemspec	100644	1.61 KB	e489de5534916ac47717539e937d5128c779932077721e1c371e2c0e7b649b80