test/test_bio-gff3.rb in bio-gff3-0.8.4 vs test/test_bio-gff3.rb in bio-gff3-0.8.5

@@ -1,7 +1,37 @@
-require 'helper'
+$: << '.'
+do_create = if ARGV[0] == '-c' or ARGV[0] == '--create'
+              ARGV.shift
+            end
+  
+require 'test/unit'
+require 'regressiontest'
 
-class TestBioGff3 < Test::Unit::TestCase
-  should "probably rename this file and start testing for real" do
-    flunk "hey buddy, you should probably rename this file and start testing for real"
+RegressionTest.create(do_create)
+
+class Gff3Test < Test::Unit::TestCase
+
+  rootpath = File.join(File.dirname(__FILE__),'..')
+  BIN = rootpath + '/bin/gff3-fetch'
+  DAT = rootpath + '/test/data'
+  def test_cache
+    assert_equal(true,single_run("mRNA #{DAT}/gff/test-ext-fasta.fa #{DAT}/gff/test-ext-fasta.gff3",'test_ext_gff3'))
+    assert_equal(true,single_run("CDS #{DAT}/gff/test.gff3",'test_gff3'))
   end
+
+  def test_nocache
+    assert_equal(true,single_run("mRNA --cache none #{DAT}/gff/test-ext-fasta.fa #{DAT}/gff/test-ext-fasta.gff3",this_method+'_ext_gff3'))
+    assert_equal(true,single_run("CDS #{DAT}/gff/test.gff3",this_method+'_gff3'))
+  end
+
+  private
+   def this_method
+     caller[0] =~ /`([^']*)'/ and $1
+   end
+
+end
+
+def single_run opts, name
+  cmd = "#{BIN} --logger stdout #{opts}"
+  # p cmd
+  RegressionTest.test `#{cmd}`,name,"#{DAT}/regression"
 end