spec/gff3_assemble_spec.rb in bio-gff3-0.8.4 vs spec/gff3_assemble_spec.rb in bio-gff3-0.8.5

@@ -11,13 +11,13 @@
 include Bio::GFFbrowser
 
 FASTAFILE="test/data/gff/MhA1_Contig1133.fa"  
 GFF3FILE="test/data/gff/MhA1_Contig1133.gff3"
 
-describe GFFdb, "Assemble CDS" do
+describe GFF3, "Assemble CDS" do
   before :all do 
-    gffdb = Bio::GFFbrowser::GFFdb.new(GFF3FILE, :fasta_filename => FASTAFILE)
-    @gff = gffdb.assembler
+    GFF3 = Bio::GFFbrowser::GFF3.new(GFF3FILE, :parser => :line, :fasta_filename => FASTAFILE)
+    @gff = GFF3.assembler
     @gff.parse
     @contigsequence = @gff.sequencelist["MhA1_Contig1133"]
     @componentlist = {}
     @cdslist = {}
     @gff.each_CDS do | id, reclist, component |