Sha256: ee2a0e100236f23036f9328f5e6a560a24d62024d6f6b61d532de0dc4ce0b4b6
Contents?: true
Size: 834 Bytes
Versions: 28
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Stored size: 834 Bytes
Contents
require "seqtrim_action"
########################################################
# Author: Almudena Bocinos Rioboo
#
# Defines the main methods that are necessary to execute ActionShortInserted
# Inherit: Plugin
########################################################
class ActionShortInsert < SeqtrimAction
def initialize(start_pos,end_pos)
super(start_pos,end_pos)
# @cut =true
@cut = false
@informative = true
end
# def apply_to(seq)
#
# # seq.seq_fasta = seq.seq_fasta.slice(start_pos,end_pos)
# $LOG.debug " Applying #{self.class}. ------ Error.Sequence is not good ------ . BEGIN: #{@start_pos} END: #{@end_pos} "
#
#
# end
def apply_decoration(char)
return char.on_red
end
end
Version data entries
28 entries across 28 versions & 1 rubygems