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<title>non_ref_count (Pileup)</title>
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<pre><span class="ruby-comment cmt"># File lib/bio/db/sam/pileup.rb, line 64</span>
<span class="ruby-keyword kw">def</span> <span class="ruby-identifier">non_ref_count</span>
<span class="ruby-keyword kw">if</span> <span class="ruby-ivar">@non_ref_count</span>.<span class="ruby-identifier">nil?</span>
<span class="ruby-ivar">@non_ref_count</span> = <span class="ruby-ivar">@read_bases</span>.<span class="ruby-identifier">count</span>(<span class="ruby-value str">"ATGCatgc"</span>).<span class="ruby-identifier">to_f</span>
<span class="ruby-keyword kw">end</span>
<span class="ruby-ivar">@non_ref_count</span>
<span class="ruby-keyword kw">end</span></pre>
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12 entries across 12 versions & 1 rubygems