Sha256: cc1b4c507677c9c755caf675ef5cbc19953101a2932ee6356d0e4ea25be9322a

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Size: 680 Bytes

Versions: 28

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Stored size: 680 Bytes

Contents

require "seqtrim_action"

########################################################
# Author: Almudena Bocinos Rioboo                      
# 
# Defines the main methods that are necessary to execute Plugin1                                                     
# Inherit: Plugin
########################################################

class ActionInducedLowComplexity < SeqtrimAction
  def initialize(start_pos,end_pos)
    super(start_pos,end_pos)
    @cut =true
  end

# def apply_to(seq)
#   
#    # seq.seq_fasta = seq.seq_fasta.slice(start_pos,end_pos)
#    $LOG.debug " Applying #{self.class} " 
#   
# end  


def apply_decoration(char)
  return char.red.bold
end  


end

Version data entries

28 entries across 28 versions & 1 rubygems

Version Path
seqtrimnext-2.0.68 lib/seqtrimnext/actions/action_induced_low_complexity.rb
seqtrimnext-2.0.66 lib/seqtrimnext/actions/action_induced_low_complexity.rb
seqtrimnext-2.0.62 lib/seqtrimnext/actions/action_induced_low_complexity.rb
seqtrimnext-2.0.61 lib/seqtrimnext/actions/action_induced_low_complexity.rb
seqtrimnext-2.0.60 lib/seqtrimnext/actions/action_induced_low_complexity.rb
seqtrimnext-2.0.59 lib/seqtrimnext/actions/action_induced_low_complexity.rb
seqtrimnext-2.0.57 lib/seqtrimnext/actions/action_induced_low_complexity.rb
seqtrimnext-2.0.56 lib/seqtrimnext/actions/action_induced_low_complexity.rb
seqtrimnext-2.0.55 lib/seqtrimnext/actions/action_induced_low_complexity.rb
seqtrimnext-2.0.54 lib/seqtrimnext/actions/action_induced_low_complexity.rb
seqtrimnext-2.0.52 lib/seqtrimnext/actions/action_induced_low_complexity.rb
seqtrimnext-2.0.51 lib/seqtrimnext/actions/action_induced_low_complexity.rb
seqtrimnext-2.0.50 lib/seqtrimnext/actions/action_induced_low_complexity.rb
seqtrimnext-2.0.49 lib/seqtrimnext/actions/action_induced_low_complexity.rb
seqtrimnext-2.0.48 lib/seqtrimnext/actions/action_induced_low_complexity.rb
seqtrimnext-2.0.46 lib/seqtrimnext/actions/action_induced_low_complexity.rb
seqtrimnext-2.0.45 lib/seqtrimnext/actions/action_induced_low_complexity.rb
seqtrimnext-2.0.42 lib/seqtrimnext/actions/action_induced_low_complexity.rb
seqtrimnext-2.0.41 lib/seqtrimnext/actions/action_induced_low_complexity.rb
seqtrimnext-2.0.39 lib/seqtrimnext/actions/action_induced_low_complexity.rb