Sha256: 70dfe2795673991ebe6c8f5b402f8d84cae1ffab6b75b72030e0f2c313902433

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Size: 732 Bytes

Versions: 19

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Stored size: 732 Bytes

Contents

require "seqtrim_action"

########################################################
# Author: Almudena Bocinos Rioboo                      
# 
# Defines the main methods that are necessary to execute Plugin1                                                     
# Inherit: Plugin
########################################################

class ActionMiddleAdapter < SeqtrimAction       
  
  def initialize(start_pos,end_pos)
     super(start_pos,end_pos)    
     @cut =true

   end
   
# def apply_to(seq)
#   
#    # seq.seq_fasta = seq.seq_fasta.slice(start_pos,end_pos)
#    $LOG.debug " Applying #{self.class}. BEGIN: #{@start_pos}   END: #{@end_pos}  " 
#   
# end  

def apply_decoration(char)
  return char.magenta
end 

end

Version data entries

19 entries across 19 versions & 1 rubygems

Version Path
seqtrimnext-2.0.68 lib/seqtrimnext/actions/action_middle_adapter.rb
seqtrimnext-2.0.66 lib/seqtrimnext/actions/action_middle_adapter.rb
seqtrimnext-2.0.62 lib/seqtrimnext/actions/action_middle_adapter.rb
seqtrimnext-2.0.61 lib/seqtrimnext/actions/action_middle_adapter.rb
seqtrimnext-2.0.60 lib/seqtrimnext/actions/action_middle_adapter.rb
seqtrimnext-2.0.59 lib/seqtrimnext/actions/action_middle_adapter.rb
seqtrimnext-2.0.57 lib/seqtrimnext/actions/action_middle_adapter.rb
seqtrimnext-2.0.56 lib/seqtrimnext/actions/action_middle_adapter.rb
seqtrimnext-2.0.55 lib/seqtrimnext/actions/action_middle_adapter.rb
seqtrimnext-2.0.54 lib/seqtrimnext/actions/action_middle_adapter.rb
seqtrimnext-2.0.52 lib/seqtrimnext/actions/action_middle_adapter.rb
seqtrimnext-2.0.51 lib/seqtrimnext/actions/action_middle_adapter.rb
seqtrimnext-2.0.50 lib/seqtrimnext/actions/action_middle_adapter.rb
seqtrimnext-2.0.49 lib/seqtrimnext/actions/action_middle_adapter.rb
seqtrimnext-2.0.48 lib/seqtrimnext/actions/action_middle_adapter.rb
seqtrimnext-2.0.46 lib/seqtrimnext/actions/action_middle_adapter.rb
seqtrimnext-2.0.45 lib/seqtrimnext/actions/action_middle_adapter.rb
seqtrimnext-2.0.42 lib/seqtrimnext/actions/action_middle_adapter.rb
seqtrimnext-2.0.41 lib/seqtrimnext/actions/action_middle_adapter.rb