Sha256: 4bdd1697d517855388cde88a73fd9757c1bddf55ecf08b59e878649332bc220c
Contents?: true
Size: 546 Bytes
Versions: 20
Compression:
Stored size: 546 Bytes
Contents
require 'spec_helper'
require 'yaml'
path = 'mspire/ident/peptide/db'
require path
describe 'reading a peptide centric db' do
before do
@pepcentric = TESTFILES + "/mspire/ident/peptide/db/uni_11_sp_tr.PEPTIDE_CENTRIC.yml"
end
it 'creates a hash that can retrieve peptides as an array' do
hash = Mspire::Ident::Peptide::Db.new(@pepcentric)
hash["AVTEQGHELSNEER"].should == ["sp|P31946|1433B_HUMAN", "sp|P31946-2|1433B_HUMAN"]
hash["VRAAR"].should == ["tr|D3DX18|D3DX18_HUMAN"]
hash["BANNANA"].should == nil
end
end
Version data entries
20 entries across 20 versions & 1 rubygems