Sha256: 3512cc06cafa6f73042103d204eda00a377f4d8bd56a1159c978c83427f0fdef

Contents?: true

Size: 546 Bytes

Versions: 11

Compression:

Stored size: 546 Bytes

Contents

# ======================================
# General parameters to extract Amplicons
# ======================================

plugin_list = PluginLowHighSize,PluginKey,PluginMids,PluginIndeterminations,PluginAbAdapters,PluginLowQuality,PluginAmplicons

# do not remove cloned sequences
remove_clonality=false

# sequences containing with diferent keys (barcodes) are saved to separate folders
use_independent_folder_for_each_key=true

# remove amplicons containing less or equal number of sequences indicated

minimal_repetitions_for_amplicons=1

Version data entries

11 entries across 11 versions & 1 rubygems

Version Path
seqtrimnext-2.0.42 lib/seqtrimnext/templates/amplicons.txt
seqtrimnext-2.0.41 lib/seqtrimnext/templates/amplicons.txt
seqtrimnext-2.0.39 lib/seqtrimnext/templates/amplicons.txt
seqtrimnext-2.0.38 lib/seqtrimnext/templates/amplicons.txt
seqtrimnext-2.0.36 lib/seqtrimnext/templates/amplicons.txt
seqtrimnext-2.0.35 lib/seqtrimnext/templates/amplicons.txt
seqtrimnext-2.0.33 lib/seqtrimnext/templates/amplicons.txt
seqtrimnext-2.0.32 lib/seqtrimnext/templates/amplicons.txt
seqtrimnext-2.0.31 lib/seqtrimnext/templates/amplicons.txt
seqtrimnext-2.0.30 lib/seqtrimnext/templates/amplicons.txt
seqtrimnext-2.0.29 lib/seqtrimnext/templates/amplicons.txt