Sha256: 1e8432ae726bdc3bdd27de65e6e1a89ef262c056539f095b1f06040437e2018b

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Versions: 25

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Contents

require 'mspire/mzml/list'
require 'mspire/mzml/processing_method'

module Mspire
  class Mzml
    class DataProcessing
      extend Mspire::Mzml::List

      attr_accessor :id, :processing_methods

      # yields self if given a block
      def initialize(id, processing_methods=[])
        @id, @processing_methods = id, processing_methods
        yield(self) if block_given?
      end

      def to_xml(builder)
        builder.dataProcessing( id: @id ) do |dp_n|
          processing_methods.each_with_index do |processing_method,order|
            processing_method.to_xml(dp_n, order)
          end
        end
        builder
      end

      # returns the order of the processing method
      def order(processing_method)
        processing_methods.index(processing_method)
      end

      def self.from_xml(xml, link)
        processing_methods = xml.children.map do |pm_n| 
          ProcessingMethod.new(link[:software_hash][pm_n[:softwareRef]])
            .describe_self_from_xml!(pm_n, link[:ref_hash])
        end
        self.new(xml[:id], processing_methods)
      end

    end
  end
end

Version data entries

25 entries across 25 versions & 1 rubygems

Version Path
mspire-0.10.8.0 lib/mspire/mzml/data_processing.rb
mspire-0.10.7.3 lib/mspire/mzml/data_processing.rb
mspire-0.10.7.2 lib/mspire/mzml/data_processing.rb
mspire-0.10.7.1 lib/mspire/mzml/data_processing.rb
mspire-0.10.7 lib/mspire/mzml/data_processing.rb
mspire-0.10.6 lib/mspire/mzml/data_processing.rb
mspire-0.10.5 lib/mspire/mzml/data_processing.rb
mspire-0.10.4 lib/mspire/mzml/data_processing.rb
mspire-0.10.3 lib/mspire/mzml/data_processing.rb
mspire-0.10.2 lib/mspire/mzml/data_processing.rb
mspire-0.10.1 lib/mspire/mzml/data_processing.rb
mspire-0.10.0 lib/mspire/mzml/data_processing.rb
mspire-0.9.2 lib/mspire/mzml/data_processing.rb
mspire-0.9.1 lib/mspire/mzml/data_processing.rb
mspire-0.9.0 lib/mspire/mzml/data_processing.rb
mspire-0.8.7 lib/mspire/mzml/data_processing.rb
mspire-0.8.6.2 lib/mspire/mzml/data_processing.rb
mspire-0.8.6.1 lib/mspire/mzml/data_processing.rb
mspire-0.8.6 lib/mspire/mzml/data_processing.rb
mspire-0.8.5 lib/mspire/mzml/data_processing.rb