# -*- encoding: utf-8 -*- # stub: bel_parser 1.0.0.alpha.15 ruby lib Gem::Specification.new do |s| s.name = "bel_parser".freeze s.version = "1.0.0.alpha.15".freeze s.required_rubygems_version = Gem::Requirement.new("> 1.3.1".freeze) if s.respond_to? :required_rubygems_version= s.require_paths = ["lib".freeze] s.authors = ["Anthony Bargnesi".freeze, "Nick Bargnesi".freeze] s.date = "2016-04-28" s.description = "Implements language versions 1.0 and 2.0.".freeze s.email = "abargnesi@selventa.com".freeze s.executables = ["bel2_validator".freeze, "bel_script_reader".freeze] s.files = [".gemspec".freeze, "CHANGELOG.md".freeze, "LICENSE".freeze, "README.md".freeze, "VERSION".freeze, "bin/bel2_validator".freeze, "bin/bel_script_reader".freeze, "lib/bel_parser.rb".freeze, "lib/bel_parser/ast_filter.rb".freeze, "lib/bel_parser/ast_generator.rb".freeze, "lib/bel_parser/expression/parser.rb".freeze, "lib/bel_parser/expression/validator.rb".freeze, "lib/bel_parser/language.rb".freeze, "lib/bel_parser/language/amino_acid.rb".freeze, "lib/bel_parser/language/apply_namespace_encoding.rb".freeze, "lib/bel_parser/language/base_specification.rb".freeze, "lib/bel_parser/language/covalent_protein_modification.rb".freeze, "lib/bel_parser/language/expression_validator.rb".freeze, "lib/bel_parser/language/function.rb".freeze, "lib/bel_parser/language/relationship.rb".freeze, "lib/bel_parser/language/semantics.rb".freeze, "lib/bel_parser/language/semantics/deeply_nested_statement.rb".freeze, "lib/bel_parser/language/semantics/function_deprecation.rb".freeze, "lib/bel_parser/language/semantics/list_function_subject.rb".freeze, "lib/bel_parser/language/semantics/multiple_subject_object.rb".freeze, "lib/bel_parser/language/semantics/non_causal_nested_statement.rb".freeze, "lib/bel_parser/language/semantics/non_object_list.rb".freeze, "lib/bel_parser/language/semantics/relationship_deprecation.rb".freeze, "lib/bel_parser/language/semantics/relationship_not_listable.rb".freeze, "lib/bel_parser/language/semantics/signature_mapping.rb".freeze, "lib/bel_parser/language/semantics_ast.rb".freeze, "lib/bel_parser/language/semantics_ast_warnings.rb".freeze, "lib/bel_parser/language/semantics_function.rb".freeze, "lib/bel_parser/language/semantics_match.rb".freeze, "lib/bel_parser/language/semantics_result.rb".freeze, "lib/bel_parser/language/semantics_type_warning.rb".freeze, "lib/bel_parser/language/semantics_warning.rb".freeze, "lib/bel_parser/language/signature.rb".freeze, "lib/bel_parser/language/specification.rb".freeze, "lib/bel_parser/language/syntax.rb".freeze, "lib/bel_parser/language/syntax/invalid_function.rb".freeze, "lib/bel_parser/language/syntax/invalid_relationship.rb".freeze, "lib/bel_parser/language/syntax/undefined_namespace.rb".freeze, "lib/bel_parser/language/syntax/undefined_namespace_value.rb".freeze, "lib/bel_parser/language/syntax_error.rb".freeze, "lib/bel_parser/language/syntax_function.rb".freeze, "lib/bel_parser/language/syntax_result.rb".freeze, "lib/bel_parser/language/syntax_warning.rb".freeze, "lib/bel_parser/language/version1_0.rb".freeze, "lib/bel_parser/language/version1_0/functions/abundance.rb".freeze, "lib/bel_parser/language/version1_0/functions/biological_process.rb".freeze, "lib/bel_parser/language/version1_0/functions/catalytic_activity.rb".freeze, "lib/bel_parser/language/version1_0/functions/cell_secretion.rb".freeze, "lib/bel_parser/language/version1_0/functions/cell_surface_expression.rb".freeze, "lib/bel_parser/language/version1_0/functions/chaperone_activity.rb".freeze, "lib/bel_parser/language/version1_0/functions/complex_abundance.rb".freeze, "lib/bel_parser/language/version1_0/functions/composite_abundance.rb".freeze, "lib/bel_parser/language/version1_0/functions/degradation.rb".freeze, "lib/bel_parser/language/version1_0/functions/fusion.rb".freeze, "lib/bel_parser/language/version1_0/functions/gene_abundance.rb".freeze, "lib/bel_parser/language/version1_0/functions/gtp_bound_activity.rb".freeze, "lib/bel_parser/language/version1_0/functions/kinase_activity.rb".freeze, "lib/bel_parser/language/version1_0/functions/list.rb".freeze, "lib/bel_parser/language/version1_0/functions/micro_rna_abundance.rb".freeze, "lib/bel_parser/language/version1_0/functions/molecular_activity.rb".freeze, "lib/bel_parser/language/version1_0/functions/pathology.rb".freeze, "lib/bel_parser/language/version1_0/functions/peptidase_activity.rb".freeze, "lib/bel_parser/language/version1_0/functions/phosphatase_activity.rb".freeze, "lib/bel_parser/language/version1_0/functions/products.rb".freeze, "lib/bel_parser/language/version1_0/functions/protein_abundance.rb".freeze, "lib/bel_parser/language/version1_0/functions/protein_modification.rb".freeze, "lib/bel_parser/language/version1_0/functions/reactants.rb".freeze, "lib/bel_parser/language/version1_0/functions/reaction.rb".freeze, "lib/bel_parser/language/version1_0/functions/ribosylation_activity.rb".freeze, "lib/bel_parser/language/version1_0/functions/rna_abundance.rb".freeze, "lib/bel_parser/language/version1_0/functions/substitution.rb".freeze, "lib/bel_parser/language/version1_0/functions/transcriptional_activity.rb".freeze, "lib/bel_parser/language/version1_0/functions/translocation.rb".freeze, "lib/bel_parser/language/version1_0/functions/transport_activity.rb".freeze, "lib/bel_parser/language/version1_0/functions/truncation.rb".freeze, "lib/bel_parser/language/version1_0/relationships/acts_in.rb".freeze, "lib/bel_parser/language/version1_0/relationships/analogous.rb".freeze, "lib/bel_parser/language/version1_0/relationships/association.rb".freeze, "lib/bel_parser/language/version1_0/relationships/biomarker_for.rb".freeze, "lib/bel_parser/language/version1_0/relationships/causes_no_change.rb".freeze, "lib/bel_parser/language/version1_0/relationships/decreases.rb".freeze, "lib/bel_parser/language/version1_0/relationships/directly_decreases.rb".freeze, "lib/bel_parser/language/version1_0/relationships/directly_increases.rb".freeze, "lib/bel_parser/language/version1_0/relationships/has_component.rb".freeze, "lib/bel_parser/language/version1_0/relationships/has_components.rb".freeze, "lib/bel_parser/language/version1_0/relationships/has_member.rb".freeze, "lib/bel_parser/language/version1_0/relationships/has_members.rb".freeze, "lib/bel_parser/language/version1_0/relationships/has_modification.rb".freeze, "lib/bel_parser/language/version1_0/relationships/has_product.rb".freeze, "lib/bel_parser/language/version1_0/relationships/has_variant.rb".freeze, "lib/bel_parser/language/version1_0/relationships/includes.rb".freeze, "lib/bel_parser/language/version1_0/relationships/increases.rb".freeze, "lib/bel_parser/language/version1_0/relationships/is_a.rb".freeze, "lib/bel_parser/language/version1_0/relationships/negative_correlation.rb".freeze, "lib/bel_parser/language/version1_0/relationships/orthologous.rb".freeze, "lib/bel_parser/language/version1_0/relationships/positive_correlation.rb".freeze, "lib/bel_parser/language/version1_0/relationships/prognostic_biomarker_for.rb".freeze, "lib/bel_parser/language/version1_0/relationships/rate_limiting_step_of.rb".freeze, "lib/bel_parser/language/version1_0/relationships/reactant_in.rb".freeze, "lib/bel_parser/language/version1_0/relationships/sub_process_of.rb".freeze, "lib/bel_parser/language/version1_0/relationships/transcribed_to.rb".freeze, "lib/bel_parser/language/version1_0/relationships/translated_to.rb".freeze, "lib/bel_parser/language/version1_0/relationships/translocates.rb".freeze, "lib/bel_parser/language/version1_0/return_types/abundance.rb".freeze, "lib/bel_parser/language/version1_0/return_types/any.rb".freeze, "lib/bel_parser/language/version1_0/return_types/biological_process.rb".freeze, "lib/bel_parser/language/version1_0/return_types/catalytic_activity.rb".freeze, "lib/bel_parser/language/version1_0/return_types/chaperone_activity.rb".freeze, "lib/bel_parser/language/version1_0/return_types/complex_abundance.rb".freeze, "lib/bel_parser/language/version1_0/return_types/fusion.rb".freeze, "lib/bel_parser/language/version1_0/return_types/gene_abundance.rb".freeze, "lib/bel_parser/language/version1_0/return_types/gtp_bound_activity.rb".freeze, "lib/bel_parser/language/version1_0/return_types/kinase_activity.rb".freeze, "lib/bel_parser/language/version1_0/return_types/list.rb".freeze, "lib/bel_parser/language/version1_0/return_types/micro_rna_abundance.rb".freeze, "lib/bel_parser/language/version1_0/return_types/molecular_activity.rb".freeze, "lib/bel_parser/language/version1_0/return_types/pathology.rb".freeze, "lib/bel_parser/language/version1_0/return_types/peptidase_activity.rb".freeze, "lib/bel_parser/language/version1_0/return_types/phosphatase_activity.rb".freeze, "lib/bel_parser/language/version1_0/return_types/products.rb".freeze, "lib/bel_parser/language/version1_0/return_types/protein_abundance.rb".freeze, "lib/bel_parser/language/version1_0/return_types/protein_modification.rb".freeze, "lib/bel_parser/language/version1_0/return_types/reactants.rb".freeze, "lib/bel_parser/language/version1_0/return_types/ribosylation_activity.rb".freeze, "lib/bel_parser/language/version1_0/return_types/rna_abundance.rb".freeze, "lib/bel_parser/language/version1_0/return_types/substitution.rb".freeze, "lib/bel_parser/language/version1_0/return_types/transcriptional_activity.rb".freeze, "lib/bel_parser/language/version1_0/return_types/transport_activity.rb".freeze, "lib/bel_parser/language/version1_0/return_types/truncation.rb".freeze, "lib/bel_parser/language/version1_0/value_encodings/abundance.rb".freeze, "lib/bel_parser/language/version1_0/value_encodings/any.rb".freeze, "lib/bel_parser/language/version1_0/value_encodings/biological_process.rb".freeze, "lib/bel_parser/language/version1_0/value_encodings/complex_abundance.rb".freeze, "lib/bel_parser/language/version1_0/value_encodings/gene_abundance.rb".freeze, "lib/bel_parser/language/version1_0/value_encodings/micro_rna_abundance.rb".freeze, "lib/bel_parser/language/version1_0/value_encodings/pathology.rb".freeze, "lib/bel_parser/language/version1_0/value_encodings/protein_abundance.rb".freeze, "lib/bel_parser/language/version1_0/value_encodings/rna_abundance.rb".freeze, "lib/bel_parser/language/version2_0.rb".freeze, "lib/bel_parser/language/version2_0/functions/abundance.rb".freeze, "lib/bel_parser/language/version2_0/functions/activity.rb".freeze, "lib/bel_parser/language/version2_0/functions/biological_process.rb".freeze, "lib/bel_parser/language/version2_0/functions/cell_secretion.rb".freeze, "lib/bel_parser/language/version2_0/functions/cell_surface_expression.rb".freeze, "lib/bel_parser/language/version2_0/functions/complex_abundance.rb".freeze, "lib/bel_parser/language/version2_0/functions/composite_abundance.rb".freeze, "lib/bel_parser/language/version2_0/functions/degradation.rb".freeze, "lib/bel_parser/language/version2_0/functions/fragment.rb".freeze, "lib/bel_parser/language/version2_0/functions/from_location.rb".freeze, "lib/bel_parser/language/version2_0/functions/fusion.rb".freeze, "lib/bel_parser/language/version2_0/functions/gene_abundance.rb".freeze, "lib/bel_parser/language/version2_0/functions/list.rb".freeze, "lib/bel_parser/language/version2_0/functions/location.rb".freeze, "lib/bel_parser/language/version2_0/functions/micro_rna_abundance.rb".freeze, "lib/bel_parser/language/version2_0/functions/molecular_activity.rb".freeze, "lib/bel_parser/language/version2_0/functions/pathology.rb".freeze, "lib/bel_parser/language/version2_0/functions/products.rb".freeze, "lib/bel_parser/language/version2_0/functions/protein_abundance.rb".freeze, "lib/bel_parser/language/version2_0/functions/protein_modification.rb".freeze, "lib/bel_parser/language/version2_0/functions/reactants.rb".freeze, "lib/bel_parser/language/version2_0/functions/reaction.rb".freeze, "lib/bel_parser/language/version2_0/functions/rna_abundance.rb".freeze, "lib/bel_parser/language/version2_0/functions/to_location.rb".freeze, "lib/bel_parser/language/version2_0/functions/translocation.rb".freeze, "lib/bel_parser/language/version2_0/functions/variant.rb".freeze, "lib/bel_parser/language/version2_0/relationships/acts_in.rb".freeze, "lib/bel_parser/language/version2_0/relationships/analogous.rb".freeze, "lib/bel_parser/language/version2_0/relationships/association.rb".freeze, "lib/bel_parser/language/version2_0/relationships/biomarker_for.rb".freeze, "lib/bel_parser/language/version2_0/relationships/causes_no_change.rb".freeze, "lib/bel_parser/language/version2_0/relationships/decreases.rb".freeze, "lib/bel_parser/language/version2_0/relationships/directly_decreases.rb".freeze, 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"lib/bel_parser/language/version2_0/relationships/positive_correlation.rb".freeze, "lib/bel_parser/language/version2_0/relationships/prognostic_biomarker_for.rb".freeze, "lib/bel_parser/language/version2_0/relationships/rate_limiting_step_of.rb".freeze, "lib/bel_parser/language/version2_0/relationships/reactant_in.rb".freeze, "lib/bel_parser/language/version2_0/relationships/regulates.rb".freeze, "lib/bel_parser/language/version2_0/relationships/sub_process_of.rb".freeze, "lib/bel_parser/language/version2_0/relationships/transcribed_to.rb".freeze, "lib/bel_parser/language/version2_0/relationships/translated_to.rb".freeze, "lib/bel_parser/language/version2_0/relationships/translocates.rb".freeze, "lib/bel_parser/language/version2_0/return_types/abundance.rb".freeze, "lib/bel_parser/language/version2_0/return_types/activity.rb".freeze, "lib/bel_parser/language/version2_0/return_types/any.rb".freeze, "lib/bel_parser/language/version2_0/return_types/biological_process.rb".freeze, "lib/bel_parser/language/version2_0/return_types/complex_abundance.rb".freeze, "lib/bel_parser/language/version2_0/return_types/fragment.rb".freeze, "lib/bel_parser/language/version2_0/return_types/from_location.rb".freeze, "lib/bel_parser/language/version2_0/return_types/fusion.rb".freeze, "lib/bel_parser/language/version2_0/return_types/gene_abundance.rb".freeze, "lib/bel_parser/language/version2_0/return_types/list.rb".freeze, "lib/bel_parser/language/version2_0/return_types/location.rb".freeze, "lib/bel_parser/language/version2_0/return_types/micro_rna_abundance.rb".freeze, "lib/bel_parser/language/version2_0/return_types/molecular_activity.rb".freeze, "lib/bel_parser/language/version2_0/return_types/pathology.rb".freeze, "lib/bel_parser/language/version2_0/return_types/products.rb".freeze, "lib/bel_parser/language/version2_0/return_types/protein_abundance.rb".freeze, "lib/bel_parser/language/version2_0/return_types/protein_modification.rb".freeze, 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"lib/bel_parser/resource/eager_reader.rb".freeze, "lib/bel_parser/resource/eager_sparql_reader.rb".freeze, "lib/bel_parser/resource/http_cache.rb".freeze, "lib/bel_parser/resource/jena_tdb_reader.rb".freeze, "lib/bel_parser/resource/lru_cache.rb".freeze, "lib/bel_parser/resource/lru_reader.rb".freeze, "lib/bel_parser/resource/reader.rb".freeze, "lib/bel_parser/resource/resource_file_reader.rb".freeze, "lib/bel_parser/resource/sparql_reader.rb".freeze, "lib/bel_parser/resource/value.rb".freeze, "lib/bel_parser/script/parser.rb".freeze, "lib/bel_parser/script/state/annotation_definition.rb".freeze, "lib/bel_parser/script/state/bel_version.rb".freeze, "lib/bel_parser/script/state/document_property.rb".freeze, "lib/bel_parser/script/state/namespace_definition.rb".freeze, "lib/bel_parser/script/state/set.rb".freeze, "lib/bel_parser/script/state/unset.rb".freeze, "lib/bel_parser/script/state_function.rb".freeze, "lib/bel_parser/script/syntax/expression_validation.rb".freeze, "lib/bel_parser/script/syntax/invalid_regex_pattern.rb".freeze, "lib/bel_parser/script/syntax/undefined_annotation.rb".freeze, "lib/bel_parser/script/syntax/undefined_annotation_value.rb".freeze, "lib/bel_parser/script/syntax/unresolvable_namespace.rb".freeze, "lib/bel_parser/script/syntax/unsupported_bel_version.rb".freeze, "lib/bel_parser/script/validator.rb".freeze, "lib/bel_parser/vendor/ast.rb".freeze, "lib/bel_parser/vendor/ast/node.rb".freeze, "lib/bel_parser/vendor/ast/processor.rb".freeze, "lib/bel_parser/vendor/ast/processor/mixin.rb".freeze, "lib/bel_parser/vendor/ast/sexp.rb".freeze] s.homepage = "https://github.com/OpenBEL/bel_parser".freeze s.licenses = ["Apache-2.0".freeze] s.required_ruby_version = Gem::Requirement.new(">= 2.0.0".freeze) s.rubygems_version = "3.5.10".freeze s.summary = "Parser for Biolgical Expression Language.".freeze end