# -*- encoding: utf-8 -*-
# stub: bioinform 0.1.17 ruby lib

Gem::Specification.new do |s|
  s.name = "bioinform".freeze
  s.version = "0.1.17".freeze

  s.required_rubygems_version = Gem::Requirement.new(">= 0".freeze) if s.respond_to? :required_rubygems_version=
  s.require_paths = ["lib".freeze]
  s.authors = ["Ilya Vorontsov".freeze]
  s.date = "2014-05-23"
  s.description = "A bunch of useful classes for bioinformatics".freeze
  s.email = ["prijutme4ty@gmail.com".freeze]
  s.executables = ["merge_into_collection".freeze, "pcm2pwm".freeze, "split_motifs".freeze]
  s.files = [".gitignore".freeze, "Gemfile".freeze, "Guardfile".freeze, "LICENSE".freeze, "README.md".freeze, "Rakefile".freeze, "TODO.txt".freeze, "bin/merge_into_collection".freeze, "bin/pcm2pwm".freeze, "bin/split_motifs".freeze, "bioinform.gemspec".freeze, "lib/bioinform.rb".freeze, "lib/bioinform/cli.rb".freeze, "lib/bioinform/cli/convert_motif.rb".freeze, "lib/bioinform/cli/merge_into_collection.rb".freeze, "lib/bioinform/cli/pcm2pwm.rb".freeze, "lib/bioinform/cli/split_motifs.rb".freeze, "lib/bioinform/conversion_algorithms/pcm2ppm_converter.rb".freeze, "lib/bioinform/conversion_algorithms/pcm2pwm_converter.rb".freeze, "lib/bioinform/conversion_algorithms/pcm2pwm_mara_converter.rb".freeze, "lib/bioinform/conversion_algorithms/ppm2pcm_converter.rb".freeze, "lib/bioinform/conversion_algorithms/ppm2pwm_converter.rb".freeze, "lib/bioinform/data_models.rb".freeze, "lib/bioinform/data_models/collection.rb".freeze, "lib/bioinform/data_models/motif.rb".freeze, "lib/bioinform/data_models/pcm.rb".freeze, "lib/bioinform/data_models/pm.rb".freeze, "lib/bioinform/data_models/ppm.rb".freeze, "lib/bioinform/data_models/pwm.rb".freeze, "lib/bioinform/formatters.rb".freeze, "lib/bioinform/formatters/raw_formatter.rb".freeze, "lib/bioinform/formatters/transfac_formatter.rb".freeze, "lib/bioinform/parsers.rb".freeze, "lib/bioinform/parsers/jaspar_parser.rb".freeze, "lib/bioinform/parsers/matrix_parser.rb".freeze, "lib/bioinform/parsers/parser.rb".freeze, "lib/bioinform/parsers/splittable_parser.rb".freeze, "lib/bioinform/parsers/string_fantom_parser.rb".freeze, "lib/bioinform/parsers/string_parser.rb".freeze, "lib/bioinform/parsers/trivial_parser.rb".freeze, "lib/bioinform/parsers/yaml_parser.rb".freeze, "lib/bioinform/support.rb".freeze, "lib/bioinform/support/advanced_scan.rb".freeze, "lib/bioinform/support/array_product.rb".freeze, "lib/bioinform/support/array_zip.rb".freeze, "lib/bioinform/support/collect_hash.rb".freeze, "lib/bioinform/support/deep_dup.rb".freeze, "lib/bioinform/support/delete_many.rb".freeze, "lib/bioinform/support/inverf.rb".freeze, "lib/bioinform/support/multiline_squish.rb".freeze, "lib/bioinform/support/parameters.rb".freeze, "lib/bioinform/support/partial_sums.rb".freeze, "lib/bioinform/support/same_by.rb".freeze, "lib/bioinform/support/strip_doc.rb".freeze, "lib/bioinform/support/third_part/active_support/core_ext/array/extract_options.rb".freeze, "lib/bioinform/support/third_part/active_support/core_ext/hash/indifferent_access.rb".freeze, "lib/bioinform/support/third_part/active_support/core_ext/hash/keys.rb".freeze, "lib/bioinform/support/third_part/active_support/core_ext/module/attribute_accessors.rb".freeze, "lib/bioinform/support/third_part/active_support/core_ext/object/try.rb".freeze, "lib/bioinform/support/third_part/active_support/core_ext/string/access.rb".freeze, "lib/bioinform/support/third_part/active_support/core_ext/string/behavior.rb".freeze, "lib/bioinform/support/third_part/active_support/core_ext/string/filters.rb".freeze, "lib/bioinform/support/third_part/active_support/core_ext/string/multibyte.rb".freeze, "lib/bioinform/support/third_part/active_support/hash_with_indifferent_access.rb".freeze, "lib/bioinform/support/third_part/active_support/multibyte.rb".freeze, "lib/bioinform/support/third_part/active_support/multibyte/chars.rb".freeze, "lib/bioinform/support/third_part/active_support/multibyte/exceptions.rb".freeze, "lib/bioinform/support/third_part/active_support/multibyte/unicode.rb".freeze, "lib/bioinform/support/third_part/active_support/multibyte/utils.rb".freeze, "lib/bioinform/version.rb".freeze, "spec/cli/cli_spec.rb".freeze, "spec/cli/convert_motif_spec.rb".freeze, "spec/cli/data/merge_into_collection/GABPA_f1.pwm".freeze, "spec/cli/data/merge_into_collection/KLF4_f2.pwm".freeze, "spec/cli/data/merge_into_collection/SP1_f1.pwm".freeze, "spec/cli/data/merge_into_collection/collection.txt.result".freeze, "spec/cli/data/merge_into_collection/collection.yaml.result".freeze, "spec/cli/data/merge_into_collection/collection_pwm.yaml.result".freeze, "spec/cli/data/merge_into_collection/pwm_folder/GABPA_f1.pwm".freeze, "spec/cli/data/merge_into_collection/pwm_folder/KLF4_f2.pwm".freeze, "spec/cli/data/merge_into_collection/pwm_folder/SP1_f1.pwm".freeze, "spec/cli/data/pcm2pwm/KLF4 f2 spaced name.pcm".freeze, "spec/cli/data/pcm2pwm/KLF4_f2.pcm".freeze, "spec/cli/data/pcm2pwm/KLF4_f2.pwm.result".freeze, "spec/cli/data/pcm2pwm/SP1_f1.pcm".freeze, "spec/cli/data/pcm2pwm/SP1_f1.pwm.result".freeze, "spec/cli/data/split_motifs/GABPA_f1.mat.result".freeze, "spec/cli/data/split_motifs/KLF4_f2.mat.result".freeze, "spec/cli/data/split_motifs/SP1_f1.mat.result".freeze, "spec/cli/data/split_motifs/collection.yaml".freeze, "spec/cli/data/split_motifs/plain_collection.txt".freeze, "spec/cli/merge_into_collection_spec.rb".freeze, "spec/cli/pcm2pwm_spec.rb".freeze, "spec/cli/shared_examples/convert_motif/motif_list_empty.rb".freeze, "spec/cli/shared_examples/convert_motif/several_motifs_specified.rb".freeze, "spec/cli/shared_examples/convert_motif/single_motif_specified.rb".freeze, "spec/cli/shared_examples/convert_motif/yield_help_string.rb".freeze, "spec/cli/shared_examples/convert_motif/yield_motif_conversion_error.rb".freeze, "spec/cli/split_motifs_spec.rb".freeze, "spec/data_models/collection_spec.rb".freeze, "spec/data_models/motif_spec.rb".freeze, "spec/data_models/pcm_spec.rb".freeze, "spec/data_models/pm_spec.rb".freeze, "spec/data_models/ppm_spec.rb".freeze, "spec/data_models/pwm_spec.rb".freeze, "spec/fabricators/collection_fabricator.rb".freeze, "spec/fabricators/motif_fabricator.rb".freeze, "spec/fabricators/motif_formats_fabricator.rb".freeze, "spec/fabricators/pcm_fabricator.rb".freeze, "spec/fabricators/pm_fabricator.rb".freeze, "spec/fabricators/ppm_fabricator.rb".freeze, "spec/fabricators/pwm_fabricator.rb".freeze, "spec/parsers/parser_spec.rb".freeze, "spec/parsers/string_fantom_parser_spec.rb".freeze, "spec/parsers/string_parser_spec.rb".freeze, "spec/parsers/trivial_parser_spec.rb".freeze, "spec/parsers/yaml_parser_spec.rb".freeze, "spec/spec_helper.rb".freeze, "spec/spec_helper_source.rb".freeze, "spec/support/advanced_scan_spec.rb".freeze, "spec/support/array_product_spec.rb".freeze, "spec/support/array_zip_spec.rb".freeze, "spec/support/collect_hash_spec.rb".freeze, "spec/support/delete_many_spec.rb".freeze, "spec/support/inverf_spec.rb".freeze, "spec/support/multiline_squish_spec.rb".freeze, "spec/support/partial_sums_spec.rb".freeze, "spec/support/same_by_spec.rb".freeze]
  s.homepage = "".freeze
  s.rubygems_version = "3.5.10".freeze
  s.summary = "Classes for work with different input formats of positional matrices and IUPAC-words and making simple transform and statistics with them. Also module includes several useful extensions for Enumerable module like parametric map and callable symbols".freeze
  s.test_files = ["spec/cli/cli_spec.rb".freeze, "spec/cli/convert_motif_spec.rb".freeze, "spec/cli/data/merge_into_collection/GABPA_f1.pwm".freeze, "spec/cli/data/merge_into_collection/KLF4_f2.pwm".freeze, "spec/cli/data/merge_into_collection/SP1_f1.pwm".freeze, "spec/cli/data/merge_into_collection/collection.txt.result".freeze, "spec/cli/data/merge_into_collection/collection.yaml.result".freeze, "spec/cli/data/merge_into_collection/collection_pwm.yaml.result".freeze, "spec/cli/data/merge_into_collection/pwm_folder/GABPA_f1.pwm".freeze, "spec/cli/data/merge_into_collection/pwm_folder/KLF4_f2.pwm".freeze, "spec/cli/data/merge_into_collection/pwm_folder/SP1_f1.pwm".freeze, "spec/cli/data/pcm2pwm/KLF4 f2 spaced name.pcm".freeze, "spec/cli/data/pcm2pwm/KLF4_f2.pcm".freeze, "spec/cli/data/pcm2pwm/KLF4_f2.pwm.result".freeze, "spec/cli/data/pcm2pwm/SP1_f1.pcm".freeze, "spec/cli/data/pcm2pwm/SP1_f1.pwm.result".freeze, "spec/cli/data/split_motifs/GABPA_f1.mat.result".freeze, "spec/cli/data/split_motifs/KLF4_f2.mat.result".freeze, "spec/cli/data/split_motifs/SP1_f1.mat.result".freeze, "spec/cli/data/split_motifs/collection.yaml".freeze, "spec/cli/data/split_motifs/plain_collection.txt".freeze, "spec/cli/merge_into_collection_spec.rb".freeze, "spec/cli/pcm2pwm_spec.rb".freeze, "spec/cli/shared_examples/convert_motif/motif_list_empty.rb".freeze, "spec/cli/shared_examples/convert_motif/several_motifs_specified.rb".freeze, "spec/cli/shared_examples/convert_motif/single_motif_specified.rb".freeze, "spec/cli/shared_examples/convert_motif/yield_help_string.rb".freeze, "spec/cli/shared_examples/convert_motif/yield_motif_conversion_error.rb".freeze, "spec/cli/split_motifs_spec.rb".freeze, "spec/data_models/collection_spec.rb".freeze, "spec/data_models/motif_spec.rb".freeze, "spec/data_models/pcm_spec.rb".freeze, "spec/data_models/pm_spec.rb".freeze, "spec/data_models/ppm_spec.rb".freeze, "spec/data_models/pwm_spec.rb".freeze, "spec/fabricators/collection_fabricator.rb".freeze, "spec/fabricators/motif_fabricator.rb".freeze, "spec/fabricators/motif_formats_fabricator.rb".freeze, "spec/fabricators/pcm_fabricator.rb".freeze, "spec/fabricators/pm_fabricator.rb".freeze, "spec/fabricators/ppm_fabricator.rb".freeze, "spec/fabricators/pwm_fabricator.rb".freeze, "spec/parsers/parser_spec.rb".freeze, "spec/parsers/string_fantom_parser_spec.rb".freeze, "spec/parsers/string_parser_spec.rb".freeze, "spec/parsers/trivial_parser_spec.rb".freeze, "spec/parsers/yaml_parser_spec.rb".freeze, "spec/spec_helper.rb".freeze, "spec/spec_helper_source.rb".freeze, "spec/support/advanced_scan_spec.rb".freeze, "spec/support/array_product_spec.rb".freeze, "spec/support/array_zip_spec.rb".freeze, "spec/support/collect_hash_spec.rb".freeze, "spec/support/delete_many_spec.rb".freeze, "spec/support/inverf_spec.rb".freeze, "spec/support/multiline_squish_spec.rb".freeze, "spec/support/partial_sums_spec.rb".freeze, "spec/support/same_by_spec.rb".freeze]

  s.specification_version = 4

  s.add_runtime_dependency(%q<docopt>.freeze, ["= 0.5.0".freeze])
end