# -*- encoding: utf-8 -*- # stub: bio-samtools 2.4.0 ruby lib # stub: ext/mkrf_conf.rb Gem::Specification.new do |s| s.name = "bio-samtools".freeze s.version = "2.4.0".freeze s.required_rubygems_version = Gem::Requirement.new(">= 0".freeze) if s.respond_to? :required_rubygems_version= s.require_paths = ["lib".freeze] s.authors = ["Ricardo Ramirez-Gonzalez".freeze, "Dan MacLean".freeze, "Raoul J.P. Bonnal".freeze] s.date = "2016-05-25" s.description = "Binder of samtools for ruby, on the top of FFI. \n\n This project was born from the need to add support of BAM files to \n the gee_fu genome browser (http://github.com/danmaclean/gee_fu).".freeze s.email = "Ricardo.Ramirez-Gonzalez@tgac.ac.uk".freeze s.executables = ["bam_consensus.rb".freeze] s.extensions = ["ext/mkrf_conf.rb".freeze] s.extra_rdoc_files = ["LICENSE.txt".freeze, "README.md".freeze] s.files = [".document".freeze, ".travis.yml".freeze, "Gemfile".freeze, "LICENSE.txt".freeze, "README.md".freeze, "Rakefile".freeze, "VERSION".freeze, "bin/bam_consensus.rb".freeze, "bio-samtools.gemspec".freeze, "doc/Bio.html".freeze, "doc/Bio/DB.html".freeze, "doc/Bio/DB/Alignment.html".freeze, "doc/Bio/DB/Pileup.html".freeze, "doc/Bio/DB/SAM.html".freeze, "doc/Bio/DB/SAM/Library.html".freeze, "doc/Bio/DB/SAM/Tools.html".freeze, "doc/Bio/DB/Tag.html".freeze, "doc/Bio/DB/Vcf.html".freeze, "doc/LICENSE_txt.html".freeze, "doc/created.rid".freeze, "doc/fonts.css".freeze, "doc/fonts/Lato-Light.ttf".freeze, "doc/fonts/Lato-LightItalic.ttf".freeze, "doc/fonts/Lato-Regular.ttf".freeze, "doc/fonts/Lato-RegularItalic.ttf".freeze, "doc/fonts/SourceCodePro-Bold.ttf".freeze, "doc/fonts/SourceCodePro-Regular.ttf".freeze, "doc/images/add.png".freeze, "doc/images/arrow_up.png".freeze, "doc/images/brick.png".freeze, "doc/images/brick_link.png".freeze, "doc/images/bug.png".freeze, "doc/images/bullet_black.png".freeze, "doc/images/bullet_toggle_minus.png".freeze, "doc/images/bullet_toggle_plus.png".freeze, "doc/images/date.png".freeze, "doc/images/delete.png".freeze, "doc/images/find.png".freeze, "doc/images/loadingAnimation.gif".freeze, "doc/images/macFFBgHack.png".freeze, "doc/images/package.png".freeze, "doc/images/page_green.png".freeze, "doc/images/page_white_text.png".freeze, "doc/images/page_white_width.png".freeze, "doc/images/plugin.png".freeze, "doc/images/ruby.png".freeze, "doc/images/tag_blue.png".freeze, "doc/images/tag_green.png".freeze, "doc/images/transparent.png".freeze, "doc/images/wrench.png".freeze, "doc/images/wrench_orange.png".freeze, "doc/images/zoom.png".freeze, "doc/index.html".freeze, "doc/js/darkfish.js".freeze, "doc/js/jquery.js".freeze, "doc/js/navigation.js".freeze, "doc/js/search.js".freeze, "doc/js/search_index.js".freeze, "doc/js/searcher.js".freeze, "doc/rdoc.css".freeze, "doc/table_of_contents.html".freeze, "ext/Makefile-bioruby.patch".freeze, "ext/Makefile-suse.patch".freeze, "ext/Rakefile".freeze, "ext/mkrf_conf.rb".freeze, "lib/bio-samtools.rb".freeze, "lib/bio/BIOExtensions.rb".freeze, "lib/bio/db/alignment.rb".freeze, "lib/bio/db/fastadb.rb".freeze, "lib/bio/db/pileup.rb".freeze, "lib/bio/db/sam.rb".freeze, "lib/bio/db/sam/external/COPYING".freeze, "lib/bio/db/sam/external/VERSION".freeze, "lib/bio/db/sam/library.rb".freeze, "lib/bio/db/vcf.rb".freeze, "test/.gitignore".freeze, "test/helper.rb".freeze, "test/sample.vcf".freeze, "test/samples/.gitignore".freeze, "test/samples/LCI/NC_001988.ffn".freeze, "test/samples/LCI/test.bam".freeze, "test/samples/LCI/test.bam.bai".freeze, "test/samples/small/dupes.bam".freeze, "test/samples/small/dupes.sam".freeze, "test/samples/small/ids2.txt".freeze, "test/samples/small/map_for_reheader.sam".freeze, "test/samples/small/map_to_merge1.bam".freeze, "test/samples/small/map_to_merge1.bam.bai".freeze, "test/samples/small/map_to_merge1.sam".freeze, "test/samples/small/map_to_merge2.bam".freeze, "test/samples/small/map_to_merge2.bam.bai".freeze, "test/samples/small/map_to_merge2.sam".freeze, "test/samples/small/no_md.sam".freeze, "test/samples/small/sorted.bam".freeze, "test/samples/small/sorted.bam.bai".freeze, "test/samples/small/test.sai".freeze, "test/samples/small/test.tam".freeze, "test/samples/small/test_chr.fasta".freeze, "test/samples/small/test_chr.fasta.1.bt2".freeze, "test/samples/small/test_chr.fasta.2.bt2".freeze, "test/samples/small/test_chr.fasta.3.bt2".freeze, "test/samples/small/test_chr.fasta.4.bt2".freeze, "test/samples/small/test_chr.fasta.amb".freeze, "test/samples/small/test_chr.fasta.ann".freeze, "test/samples/small/test_chr.fasta.bwt".freeze, "test/samples/small/test_chr.fasta.pac".freeze, "test/samples/small/test_chr.fasta.rbwt".freeze, "test/samples/small/test_chr.fasta.rev.1.bt2".freeze, "test/samples/small/test_chr.fasta.rev.2.bt2".freeze, "test/samples/small/test_chr.fasta.rpac".freeze, "test/samples/small/test_chr.fasta.rsa".freeze, "test/samples/small/test_chr.fasta.sa".freeze, "test/samples/small/test_cov.svg".freeze, "test/samples/small/testu.bam".freeze, "test/samples/small/testu.bed".freeze, "test/test_bio-samtools.rb".freeze, "test/test_pileup.rb".freeze, "test/test_sam.rb".freeze, "test/test_vcf.rb".freeze, "tutorial/tutorial.html".freeze, "tutorial/tutorial.md".freeze, "tutorial/tutorial.pdf".freeze] s.homepage = "http://github.com/helios/bioruby-samtools".freeze s.licenses = ["MIT".freeze] s.rubygems_version = "3.5.10".freeze s.summary = "Binder of samtools for ruby, on the top of FFI.".freeze s.specification_version = 4 s.add_runtime_dependency(%q.freeze, [">= 0.4.1".freeze]) s.add_runtime_dependency(%q.freeze, [">= 1.4.2".freeze]) s.add_runtime_dependency(%q.freeze, [">= 0".freeze]) s.add_development_dependency(%q.freeze, ["> 2.10".freeze]) s.add_development_dependency(%q.freeze, [">= 0".freeze]) s.add_development_dependency(%q.freeze, [">= 0".freeze]) s.add_development_dependency(%q.freeze, ["> 1.0.21".freeze]) s.add_development_dependency(%q.freeze, [">= 0".freeze]) s.add_development_dependency(%q.freeze, [">= 0".freeze]) s.add_development_dependency(%q.freeze, [">= 0".freeze]) s.add_development_dependency(%q.freeze, [">= 0".freeze]) s.add_development_dependency(%q.freeze, [">= 0".freeze]) s.add_development_dependency(%q.freeze, [">= 0".freeze]) end