# -*- encoding: utf-8 -*- # stub: rbbt-util 5.32.24 ruby lib Gem::Specification.new do |s| s.name = "rbbt-util".freeze s.version = "5.32.24".freeze s.required_rubygems_version = Gem::Requirement.new(">= 0".freeze) if s.respond_to? :required_rubygems_version= s.require_paths = ["lib".freeze] s.authors = ["Miguel Vazquez".freeze] s.date = "2021-11-09" s.description = "Utilities for handling tsv files, caches, etc".freeze s.email = "miguel.vazquez.g@bsc.es".freeze s.executables = ["rbbt_query.rb".freeze, "rbbt_exec.rb".freeze, "rbbt_Rutil.rb".freeze, "rbbt".freeze, "rbbt_dangling_locks.rb".freeze] s.extra_rdoc_files = ["LICENSE".freeze, "README.rdoc".freeze] s.files = ["LICENSE".freeze, "README.rdoc".freeze, "bin/rbbt".freeze, "bin/rbbt_Rutil.rb".freeze, "bin/rbbt_dangling_locks.rb".freeze, "bin/rbbt_exec.rb".freeze, "bin/rbbt_query.rb".freeze, "etc/app.d/base.rb".freeze, "etc/app.d/entities.rb".freeze, "etc/app.d/finder.rb".freeze, "etc/app.d/foundation.rb".freeze, "etc/app.d/grid_system.rb".freeze, "etc/app.d/init.rb".freeze, "etc/app.d/knowledge_bases.rb".freeze, "etc/app.d/remote_workflow_tasks.rb".freeze, "etc/app.d/requires.rb".freeze, "etc/app.d/resources.rb".freeze, "etc/app.d/semaphores.rb".freeze, "etc/app.d/workflows.rb".freeze, "lib/rbbt-util.rb".freeze, "lib/rbbt.rb".freeze, "lib/rbbt/annotations.rb".freeze, "lib/rbbt/annotations/annotated_array.rb".freeze, "lib/rbbt/annotations/util.rb".freeze, "lib/rbbt/association.rb".freeze, "lib/rbbt/association/database.rb".freeze, "lib/rbbt/association/index.rb".freeze, "lib/rbbt/association/item.rb".freeze, "lib/rbbt/association/open.rb".freeze, "lib/rbbt/association/util.rb".freeze, "lib/rbbt/entity.rb".freeze, "lib/rbbt/entity/identifiers.rb".freeze, "lib/rbbt/fix_width_table.rb".freeze, "lib/rbbt/hpc.rb".freeze, "lib/rbbt/hpc/batch.rb".freeze, "lib/rbbt/hpc/lsf.rb".freeze, "lib/rbbt/hpc/orchestrate.rb".freeze, "lib/rbbt/hpc/slurm.rb".freeze, "lib/rbbt/knowledge_base.rb".freeze, "lib/rbbt/knowledge_base/enrichment.rb".freeze, "lib/rbbt/knowledge_base/entity.rb".freeze, "lib/rbbt/knowledge_base/query.rb".freeze, "lib/rbbt/knowledge_base/registry.rb".freeze, "lib/rbbt/knowledge_base/syndicate.rb".freeze, "lib/rbbt/knowledge_base/traverse.rb".freeze, "lib/rbbt/monitor.rb".freeze, "lib/rbbt/packed_index.rb".freeze, "lib/rbbt/persist.rb".freeze, "lib/rbbt/persist/tsv.rb".freeze, "lib/rbbt/persist/tsv/adapter.rb".freeze, "lib/rbbt/persist/tsv/cdb.rb".freeze, "lib/rbbt/persist/tsv/fix_width_table.rb".freeze, "lib/rbbt/persist/tsv/kyotocabinet.rb".freeze, "lib/rbbt/persist/tsv/leveldb.rb".freeze, "lib/rbbt/persist/tsv/lmdb.rb".freeze, "lib/rbbt/persist/tsv/packed_index.rb".freeze, "lib/rbbt/persist/tsv/sharder.rb".freeze, "lib/rbbt/persist/tsv/tokyocabinet.rb".freeze, "lib/rbbt/resource.rb".freeze, "lib/rbbt/resource/path.rb".freeze, "lib/rbbt/resource/rake.rb".freeze, "lib/rbbt/resource/util.rb".freeze, "lib/rbbt/resource/with_key.rb".freeze, 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"lib/rbbt/workflow/step/accessor.rb".freeze, "lib/rbbt/workflow/step/dependencies.rb".freeze, "lib/rbbt/workflow/step/info.rb".freeze, "lib/rbbt/workflow/step/prepare.rb".freeze, "lib/rbbt/workflow/step/run.rb".freeze, "lib/rbbt/workflow/step/status.rb".freeze, "lib/rbbt/workflow/task.rb".freeze, "lib/rbbt/workflow/usage.rb".freeze, "lib/rbbt/workflow/util/archive.rb".freeze, "lib/rbbt/workflow/util/data.rb".freeze, "lib/rbbt/workflow/util/orchestrator.rb".freeze, "lib/rbbt/workflow/util/provenance.rb".freeze, "lib/rbbt/workflow/util/trace.rb".freeze, "python/rbbt.py".freeze, "share/Rlib/plot.R".freeze, "share/Rlib/svg.R".freeze, "share/Rlib/util.R".freeze, "share/color/color_names".freeze, "share/color/diverging_colors.hex".freeze, "share/config.ru".freeze, "share/install/software/lib/install_helpers".freeze, "share/rbbt_commands/alias".freeze, "share/rbbt_commands/ansible".freeze, "share/rbbt_commands/app/install".freeze, "share/rbbt_commands/app/start".freeze, "share/rbbt_commands/app/template".freeze, "share/rbbt_commands/association/subset".freeze, "share/rbbt_commands/benchmark/pthrough".freeze, "share/rbbt_commands/benchmark/throughput".freeze, "share/rbbt_commands/benchmark/tsv".freeze, "share/rbbt_commands/check_bgzf".freeze, "share/rbbt_commands/cmd".freeze, "share/rbbt_commands/color".freeze, "share/rbbt_commands/conf/web_user/add".freeze, "share/rbbt_commands/conf/web_user/list".freeze, "share/rbbt_commands/conf/web_user/remove".freeze, "share/rbbt_commands/file_server/add".freeze, "share/rbbt_commands/file_server/list".freeze, "share/rbbt_commands/file_server/remove".freeze, "share/rbbt_commands/hpc/clean".freeze, "share/rbbt_commands/hpc/list".freeze, "share/rbbt_commands/hpc/orchestrate".freeze, "share/rbbt_commands/hpc/tail".freeze, "share/rbbt_commands/hpc/task".freeze, "share/rbbt_commands/log".freeze, "share/rbbt_commands/lsf/clean".freeze, "share/rbbt_commands/lsf/list".freeze, "share/rbbt_commands/lsf/orchestrate".freeze, 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"share/rbbt_commands/study/maf2study".freeze, "share/rbbt_commands/study/task".freeze, "share/rbbt_commands/system/clean".freeze, "share/rbbt_commands/system/deleted_files".freeze, "share/rbbt_commands/system/optimize".freeze, "share/rbbt_commands/system/purge".freeze, "share/rbbt_commands/system/report".freeze, "share/rbbt_commands/system/status".freeze, "share/rbbt_commands/tsv/assemble_pdf_table".freeze, "share/rbbt_commands/tsv/attach".freeze, "share/rbbt_commands/tsv/change_id".freeze, "share/rbbt_commands/tsv/collapse".freeze, "share/rbbt_commands/tsv/get".freeze, "share/rbbt_commands/tsv/head".freeze, "share/rbbt_commands/tsv/info".freeze, "share/rbbt_commands/tsv/json".freeze, "share/rbbt_commands/tsv/keys".freeze, "share/rbbt_commands/tsv/query".freeze, "share/rbbt_commands/tsv/read".freeze, "share/rbbt_commands/tsv/read_excel".freeze, "share/rbbt_commands/tsv/slice".freeze, "share/rbbt_commands/tsv/sort".freeze, "share/rbbt_commands/tsv/subset".freeze, 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"test/rbbt/util/test_simpleDSL.rb".freeze, "test/rbbt/util/test_simpleopt.rb".freeze, "test/rbbt/util/test_tmpfile.rb".freeze, "test/rbbt/workflow/step/test_dependencies.rb".freeze, "test/rbbt/workflow/test_doc.rb".freeze, "test/rbbt/workflow/test_remote_workflow.rb".freeze, "test/rbbt/workflow/test_schedule.rb".freeze, "test/rbbt/workflow/test_step.rb".freeze, "test/rbbt/workflow/test_task.rb".freeze, "test/rbbt/workflow/util/test_archive.rb".freeze, "test/rbbt/workflow/util/test_data.rb".freeze, "test/rbbt/workflow/util/test_orchestrator.rb".freeze, "test/test_helper.rb".freeze] s.homepage = "http://github.com/mikisvaz/rbbt-util".freeze s.licenses = ["MIT".freeze] s.rubygems_version = "3.5.10".freeze s.summary = "Utilities for the Ruby Bioinformatics Toolkit (rbbt)".freeze s.test_files = ["test/rbbt/test_entity.rb".freeze, "test/rbbt/workflow/test_remote_workflow.rb".freeze, "test/rbbt/workflow/util/test_archive.rb".freeze, "test/rbbt/workflow/util/test_orchestrator.rb".freeze, "test/rbbt/workflow/util/test_data.rb".freeze, "test/rbbt/workflow/test_doc.rb".freeze, "test/rbbt/workflow/test_schedule.rb".freeze, "test/rbbt/workflow/test_step.rb".freeze, "test/rbbt/workflow/step/test_dependencies.rb".freeze, "test/rbbt/workflow/test_task.rb".freeze, "test/rbbt/resource/test_path.rb".freeze, "test/rbbt/util/test_colorize.rb".freeze, "test/rbbt/util/test_procpath.rb".freeze, "test/rbbt/util/misc/test_development.rb".freeze, "test/rbbt/util/misc/test_omics.rb".freeze, "test/rbbt/util/misc/test_pipes.rb".freeze, "test/rbbt/util/misc/test_format.rb".freeze, "test/rbbt/util/misc/test_lock.rb".freeze, "test/rbbt/util/misc/test_multipart_payload.rb".freeze, "test/rbbt/util/misc/test_bgzf.rb".freeze, "test/rbbt/util/test_concurrency.rb".freeze, "test/rbbt/util/test_cmd.rb".freeze, "test/rbbt/util/R/test_plot.rb".freeze, "test/rbbt/util/R/test_eval.rb".freeze, "test/rbbt/util/R/test_model.rb".freeze, "test/rbbt/util/test_config.rb".freeze, "test/rbbt/util/test_log.rb".freeze, "test/rbbt/util/test_simpleDSL.rb".freeze, "test/rbbt/util/log/test_progress.rb".freeze, "test/rbbt/util/test_tmpfile.rb".freeze, "test/rbbt/util/test_R.rb".freeze, "test/rbbt/util/test_excel2tsv.rb".freeze, "test/rbbt/util/test_misc.rb".freeze, "test/rbbt/util/test_open.rb".freeze, "test/rbbt/util/test_simpleopt.rb".freeze, "test/rbbt/util/simpleopt/test_parse.rb".freeze, "test/rbbt/util/simpleopt/test_setup.rb".freeze, "test/rbbt/util/simpleopt/test_get.rb".freeze, "test/rbbt/util/test_python.rb".freeze, "test/rbbt/util/test_filecache.rb".freeze, "test/rbbt/util/concurrency/test_processes.rb".freeze, "test/rbbt/util/concurrency/test_threads.rb".freeze, "test/rbbt/util/concurrency/processes/test_socket.rb".freeze, "test/rbbt/util/test_semaphore.rb".freeze, "test/rbbt/util/test_chain_methods.rb".freeze, "test/rbbt/util/test_migrate.rb".freeze, "test/rbbt/test_resource.rb".freeze, "test/rbbt/test_packed_index.rb".freeze, "test/rbbt/tsv/test_change_id.rb".freeze, "test/rbbt/tsv/test_attach.rb".freeze, "test/rbbt/tsv/test_filter.rb".freeze, "test/rbbt/tsv/test_parser.rb".freeze, "test/rbbt/tsv/test_csv.rb".freeze, "test/rbbt/tsv/test_accessor.rb".freeze, "test/rbbt/tsv/test_matrix.rb".freeze, "test/rbbt/tsv/test_field_index.rb".freeze, "test/rbbt/tsv/test_util.rb".freeze, "test/rbbt/tsv/test_index.rb".freeze, "test/rbbt/tsv/test_parallel.rb".freeze, "test/rbbt/tsv/test_manipulate.rb".freeze, "test/rbbt/tsv/test_excel.rb".freeze, "test/rbbt/tsv/parallel/test_through.rb".freeze, "test/rbbt/tsv/parallel/test_traverse.rb".freeze, "test/rbbt/tsv/test_stream.rb".freeze, "test/rbbt/test_association.rb".freeze, "test/rbbt/hpc/test_batch.rb".freeze, "test/rbbt/hpc/test_slurm.rb".freeze, "test/rbbt/association/test_database.rb".freeze, "test/rbbt/association/test_item.rb".freeze, "test/rbbt/association/test_open.rb".freeze, "test/rbbt/association/test_util.rb".freeze, "test/rbbt/association/test_index.rb".freeze, "test/rbbt/test_knowledge_base.rb".freeze, "test/rbbt/persist/tsv/test_kyotocabinet.rb".freeze, "test/rbbt/persist/tsv/test_cdb.rb".freeze, "test/rbbt/persist/tsv/test_lmdb.rb".freeze, "test/rbbt/persist/tsv/test_sharder.rb".freeze, "test/rbbt/persist/tsv/test_leveldb.rb".freeze, "test/rbbt/persist/tsv/test_tokyocabinet.rb".freeze, "test/rbbt/persist/test_tsv.rb".freeze, "test/rbbt/test_tsv.rb".freeze, "test/rbbt/test_annotations.rb".freeze, "test/rbbt/test_fix_width_table.rb".freeze, "test/rbbt/test_workflow.rb".freeze, "test/rbbt/entity/test_identifiers.rb".freeze, "test/rbbt/annotations/test_util.rb".freeze, "test/rbbt/test_hpc.rb".freeze, "test/rbbt/test_monitor.rb".freeze, "test/rbbt/test_persist.rb".freeze, "test/rbbt/knowledge_base/test_entity.rb".freeze, "test/rbbt/knowledge_base/test_registry.rb".freeze, "test/rbbt/knowledge_base/test_syndicate.rb".freeze, "test/rbbt/knowledge_base/test_query.rb".freeze, "test/rbbt/knowledge_base/test_enrichment.rb".freeze, "test/rbbt/knowledge_base/test_traverse.rb".freeze, "test/test_helper.rb".freeze] s.specification_version = 4 s.add_runtime_dependency(%q.freeze, [">= 0".freeze]) s.add_runtime_dependency(%q.freeze, [">= 0".freeze]) s.add_runtime_dependency(%q.freeze, [">= 0".freeze]) s.add_runtime_dependency(%q.freeze, [">= 0".freeze]) s.add_runtime_dependency(%q.freeze, [">= 0".freeze]) s.add_runtime_dependency(%q.freeze, [">= 0".freeze]) s.add_runtime_dependency(%q.freeze, [">= 0".freeze]) s.add_runtime_dependency(%q.freeze, [">= 0".freeze]) s.add_runtime_dependency(%q.freeze, [">= 0".freeze]) s.add_runtime_dependency(%q.freeze, [">= 0".freeze]) s.add_runtime_dependency(%q.freeze, [">= 0".freeze]) end