# -*- encoding: utf-8 -*- # stub: bio 0.7.0 ruby lib Gem::Specification.new do |s| s.name = "bio".freeze s.version = "0.7.0".freeze s.required_rubygems_version = Gem::Requirement.new(">= 0".freeze) if s.respond_to? :required_rubygems_version= s.require_paths = ["lib".freeze] s.authors = ["BioRuby project".freeze] s.autorequire = "bio".freeze s.date = "2005-12-19" s.email = "staff@bioruby.org".freeze s.files = ["bin/bioruby".freeze, "bin/br_biofetch.rb".freeze, "bin/br_bioflat.rb".freeze, "bin/br_biogetseq.rb".freeze, "bin/br_pmfetch.rb".freeze, "doc/BioRuby.rd.ja".freeze, "doc/Changes-0.7.rd".freeze, "doc/Design.rd.ja".freeze, "doc/KEGG_API.rd".freeze, "doc/KEGG_API.rd.ja".freeze, "doc/TODO.rd.ja".freeze, "doc/Tutorial.rd".freeze, "doc/Tutorial.rd.ja".freeze, "etc/bioinformatics".freeze, "etc/bioinformatics/seqdatabase.ini".freeze, "lib/bio".freeze, "lib/bio.rb".freeze, "lib/bio/alignment.rb".freeze, "lib/bio/appl".freeze, "lib/bio/appl/bl2seq".freeze, "lib/bio/appl/bl2seq/report.rb".freeze, "lib/bio/appl/blast".freeze, "lib/bio/appl/blast.rb".freeze, "lib/bio/appl/blast/format0.rb".freeze, "lib/bio/appl/blast/format8.rb".freeze, "lib/bio/appl/blast/report.rb".freeze, "lib/bio/appl/blast/rexml.rb".freeze, "lib/bio/appl/blast/wublast.rb".freeze, "lib/bio/appl/blast/xmlparser.rb".freeze, "lib/bio/appl/blat".freeze, "lib/bio/appl/blat/report.rb".freeze, "lib/bio/appl/clustalw".freeze, "lib/bio/appl/clustalw.rb".freeze, "lib/bio/appl/clustalw/report.rb".freeze, "lib/bio/appl/emboss.rb".freeze, "lib/bio/appl/fasta".freeze, "lib/bio/appl/fasta.rb".freeze, "lib/bio/appl/fasta/format10.rb".freeze, "lib/bio/appl/fasta/format6.rb".freeze, "lib/bio/appl/genscan".freeze, "lib/bio/appl/genscan/report.rb".freeze, "lib/bio/appl/hmmer".freeze, "lib/bio/appl/hmmer.rb".freeze, "lib/bio/appl/hmmer/report.rb".freeze, "lib/bio/appl/mafft".freeze, "lib/bio/appl/mafft.rb".freeze, "lib/bio/appl/mafft/report.rb".freeze, "lib/bio/appl/psort".freeze, "lib/bio/appl/psort.rb".freeze, "lib/bio/appl/psort/report.rb".freeze, "lib/bio/appl/sim4".freeze, "lib/bio/appl/sim4.rb".freeze, "lib/bio/appl/sim4/report.rb".freeze, "lib/bio/appl/sosui".freeze, "lib/bio/appl/sosui/report.rb".freeze, "lib/bio/appl/spidey".freeze, "lib/bio/appl/spidey/report.rb".freeze, "lib/bio/appl/targetp".freeze, "lib/bio/appl/targetp/report.rb".freeze, "lib/bio/appl/tmhmm".freeze, "lib/bio/appl/tmhmm/report.rb".freeze, "lib/bio/command.rb".freeze, "lib/bio/data".freeze, "lib/bio/data/aa.rb".freeze, "lib/bio/data/codontable.rb".freeze, "lib/bio/data/na.rb".freeze, "lib/bio/db".freeze, "lib/bio/db.rb".freeze, "lib/bio/db/aaindex.rb".freeze, "lib/bio/db/embl".freeze, "lib/bio/db/embl/common.rb".freeze, "lib/bio/db/embl/embl.rb".freeze, "lib/bio/db/embl/sptr.rb".freeze, "lib/bio/db/embl/swissprot.rb".freeze, "lib/bio/db/embl/trembl.rb".freeze, "lib/bio/db/embl/uniprot.rb".freeze, "lib/bio/db/fantom.rb".freeze, "lib/bio/db/fasta.rb".freeze, "lib/bio/db/genbank".freeze, "lib/bio/db/genbank/common.rb".freeze, "lib/bio/db/genbank/ddbj.rb".freeze, "lib/bio/db/genbank/genbank.rb".freeze, "lib/bio/db/genbank/genpept.rb".freeze, "lib/bio/db/genbank/refseq.rb".freeze, "lib/bio/db/gff.rb".freeze, "lib/bio/db/go.rb".freeze, "lib/bio/db/kegg".freeze, "lib/bio/db/kegg/brite.rb".freeze, "lib/bio/db/kegg/cell.rb".freeze, "lib/bio/db/kegg/compound.rb".freeze, "lib/bio/db/kegg/enzyme.rb".freeze, "lib/bio/db/kegg/expression.rb".freeze, "lib/bio/db/kegg/genes.rb".freeze, "lib/bio/db/kegg/genome.rb".freeze, "lib/bio/db/kegg/glycan.rb".freeze, "lib/bio/db/kegg/keggtab.rb".freeze, "lib/bio/db/kegg/kgml.rb".freeze, "lib/bio/db/kegg/ko.rb".freeze, "lib/bio/db/kegg/reaction.rb".freeze, "lib/bio/db/litdb.rb".freeze, "lib/bio/db/medline.rb".freeze, "lib/bio/db/nbrf.rb".freeze, "lib/bio/db/pdb".freeze, "lib/bio/db/pdb.rb".freeze, "lib/bio/db/pdb/atom.rb".freeze, "lib/bio/db/pdb/chain.rb".freeze, "lib/bio/db/pdb/model.rb".freeze, "lib/bio/db/pdb/pdb.rb".freeze, "lib/bio/db/pdb/residue.rb".freeze, "lib/bio/db/pdb/utils.rb".freeze, "lib/bio/db/prosite.rb".freeze, "lib/bio/db/rebase.rb".freeze, "lib/bio/db/transfac.rb".freeze, "lib/bio/feature.rb".freeze, "lib/bio/io".freeze, "lib/bio/io/brdb.rb".freeze, "lib/bio/io/das.rb".freeze, "lib/bio/io/dbget.rb".freeze, "lib/bio/io/ddbjxml.rb".freeze, "lib/bio/io/fastacmd.rb".freeze, "lib/bio/io/fetch.rb".freeze, "lib/bio/io/flatfile".freeze, "lib/bio/io/flatfile.rb".freeze, "lib/bio/io/flatfile/bdb.rb".freeze, "lib/bio/io/flatfile/index.rb".freeze, "lib/bio/io/flatfile/indexer.rb".freeze, "lib/bio/io/higet.rb".freeze, "lib/bio/io/keggapi.rb".freeze, "lib/bio/io/pubmed.rb".freeze, "lib/bio/io/registry.rb".freeze, "lib/bio/io/soapwsdl.rb".freeze, "lib/bio/io/sql.rb".freeze, "lib/bio/location.rb".freeze, "lib/bio/pathway.rb".freeze, "lib/bio/reference.rb".freeze, "lib/bio/sequence.rb".freeze, "lib/bio/shell".freeze, "lib/bio/shell.rb".freeze, "lib/bio/shell/core.rb".freeze, "lib/bio/shell/plugin".freeze, "lib/bio/shell/plugin/codon.rb".freeze, "lib/bio/shell/plugin/entry.rb".freeze, "lib/bio/shell/plugin/flatfile.rb".freeze, "lib/bio/shell/plugin/keggapi.rb".freeze, "lib/bio/shell/plugin/midi.rb".freeze, "lib/bio/shell/plugin/obda.rb".freeze, "lib/bio/shell/plugin/seq.rb".freeze, "lib/bio/shell/session.rb".freeze, "lib/bio/util".freeze, "lib/bio/util/color_scheme".freeze, "lib/bio/util/color_scheme.rb".freeze, "lib/bio/util/color_scheme/buried.rb".freeze, "lib/bio/util/color_scheme/helix.rb".freeze, "lib/bio/util/color_scheme/hydropathy.rb".freeze, "lib/bio/util/color_scheme/nucleotide.rb".freeze, "lib/bio/util/color_scheme/strand.rb".freeze, "lib/bio/util/color_scheme/taylor.rb".freeze, "lib/bio/util/color_scheme/turn.rb".freeze, "lib/bio/util/color_scheme/zappo.rb".freeze, "lib/bio/util/contingency_table.rb".freeze, "lib/bio/util/sirna.rb".freeze, "lib/bioruby.rb".freeze, "sample/biofetch.rb".freeze, "sample/color_scheme_na.rb".freeze, "sample/dbget".freeze, "sample/fasta2tab.rb".freeze, "sample/fsplit.rb".freeze, "sample/gb2fasta.rb".freeze, "sample/gb2tab.rb".freeze, "sample/gbtab2mysql.rb".freeze, "sample/genes2nuc.rb".freeze, "sample/genes2pep.rb".freeze, "sample/genes2tab.rb".freeze, "sample/genome2rb.rb".freeze, "sample/genome2tab.rb".freeze, "sample/goslim.rb".freeze, "sample/gt2fasta.rb".freeze, "sample/pmfetch.rb".freeze, "sample/pmsearch.rb".freeze, "sample/psortplot_html.rb".freeze, "sample/ssearch2tab.rb".freeze, "sample/tdiary.rb".freeze, "sample/tfastx2tab.rb".freeze, "sample/vs-genes.rb".freeze, "test/data".freeze, "test/data/SOSUI".freeze, "test/data/SOSUI/sample.report".freeze, "test/data/TMHMM".freeze, "test/data/TMHMM/sample.report".freeze, "test/data/blast".freeze, "test/data/blast/eco:b0002.faa".freeze, "test/data/blast/eco:b0002.faa.m0".freeze, "test/data/blast/eco:b0002.faa.m7".freeze, "test/data/blast/eco:b0002.faa.m8".freeze, "test/data/embl".freeze, "test/data/embl/AB090716.embl".freeze, "test/data/genscan".freeze, "test/data/genscan/sample.report".freeze, "test/data/prosite".freeze, "test/data/prosite/prosite.dat".freeze, "test/data/refseq".freeze, "test/data/refseq/nm_126355.entret".freeze, "test/data/uniprot".freeze, "test/data/uniprot/p53_human.uniprot".freeze, "test/functional".freeze, "test/functional/bio".freeze, "test/functional/bio/io".freeze, "test/runner.rb".freeze, "test/unit".freeze, "test/unit/bio".freeze, "test/unit/bio/appl".freeze, "test/unit/bio/appl/blast".freeze, "test/unit/bio/appl/blast/test_report.rb".freeze, "test/unit/bio/appl/blast/test_xmlparser.rb".freeze, "test/unit/bio/appl/genscan".freeze, "test/unit/bio/appl/genscan/test_report.rb".freeze, "test/unit/bio/appl/sosui".freeze, "test/unit/bio/appl/sosui/test_report.rb".freeze, "test/unit/bio/appl/targetp".freeze, "test/unit/bio/appl/targetp/test_report.rb".freeze, "test/unit/bio/appl/test_blast.rb".freeze, "test/unit/bio/appl/test_fasta.rb".freeze, "test/unit/bio/appl/tmhmm".freeze, "test/unit/bio/appl/tmhmm/test_report.rb".freeze, "test/unit/bio/data".freeze, "test/unit/bio/data/test_aa.rb".freeze, "test/unit/bio/data/test_codontable.rb".freeze, "test/unit/bio/data/test_na.rb".freeze, "test/unit/bio/db".freeze, "test/unit/bio/db/embl".freeze, "test/unit/bio/db/embl/test_common.rb".freeze, "test/unit/bio/db/embl/test_embl.rb".freeze, "test/unit/bio/db/embl/test_sptr.rb".freeze, "test/unit/bio/db/embl/test_uniprot.rb".freeze, "test/unit/bio/db/kegg".freeze, "test/unit/bio/db/kegg/test_genes.rb".freeze, "test/unit/bio/db/test_fasta.rb".freeze, "test/unit/bio/db/test_gff.rb".freeze, "test/unit/bio/db/test_prosite.rb".freeze, "test/unit/bio/io".freeze, "test/unit/bio/io/test_ddbjxml.rb".freeze, "test/unit/bio/io/test_soapwsdl.rb".freeze, "test/unit/bio/shell".freeze, "test/unit/bio/shell/plugin".freeze, "test/unit/bio/shell/plugin/test_seq.rb".freeze, "test/unit/bio/test_alignment.rb".freeze, "test/unit/bio/test_command.rb".freeze, "test/unit/bio/test_db.rb".freeze, "test/unit/bio/test_feature.rb".freeze, "test/unit/bio/test_location.rb".freeze, "test/unit/bio/test_pathway.rb".freeze, "test/unit/bio/test_sequence.rb".freeze, "test/unit/bio/test_shell.rb".freeze, "test/unit/bio/util".freeze, "test/unit/bio/util/test_color_scheme.rb".freeze, "test/unit/bio/util/test_contingency_table.rb".freeze, "test/unit/bio/util/test_sirna.rb".freeze] s.homepage = "http://bioruby.org/".freeze s.required_ruby_version = Gem::Requirement.new("> 0.0.0".freeze) s.rubygems_version = "3.5.10".freeze s.summary = "BioRuby is a library for bioinformatics (biology + information science).".freeze end