README.rdoc in snp-search-0.21.0 vs README.rdoc in snp-search-0.22.0

@@ -56,10 +56,10 @@
 
 == Examples
 
 We have included two example queries that you may find useful:
 
-* Example1: This script queries the database and selects all genes except the phage genes.  The output is a FASTA file of the genes.  This is a way of removing a set of genes that are not needed for the SNP analysis. You may use this script to do other SQL queries that result in a FASTA output.
+* Example1: This script queries the database to select only those SNPs not found in phage related genes. These SNPs were used to make a concatenated SNP multiple alignment file (FASTA format).  This is a way of removing a set of genes that are not needed for the SNP analysis. You may use this script to do other SQL queries that result in a FASTA output.
 
 Usage:
 
   ruby example1.rb -d your_db_name.sqlite3 -s list_of_your_species.txt -o output.fasta