plugin_mids.rb in seqtrimnext-2.0.46

- old
+ new

@@ -27,11 +27,11 @@
   end
   
   def do_blasts(seqs)
      # find MIDS  with less results than max_target_seqs value 
      blast = BatchBlast.new("-db #{@params.get_param('mids_db')}",'blastn'," -task blastn-short    -perc_identity #{@params.get_param('blast_percent_mids')} -max_target_seqs 4 ")  #get mids 
-     $LOG.info('BLAST:'+blast.get_blast_cmd)
+     $LOG.debug('BLAST:'+blast.get_blast_cmd)
 
      fastas=[]
      
      seqs.each do |seq|
       fastas.push ">"+seq.seq_name
@@ -52,10 +52,10 @@
     if blast_query.query_id != seq.seq_name
       raise "Blast and seq names does not match, blast:#{blast_query.query_id} sn:#{seq.seq_name}"
     end
 
      
-     $LOG.info "[#{self.class.to_s}, seq: #{seq.seq_name}]: looking for mids into the sequence"   
+     $LOG.debug "[#{self.class.to_s}, seq: #{seq.seq_name}]: looking for mids into the sequence"   
       
 
      # blast_table_results = blast.do_blast(seq.seq_fasta[0..SIZE_SEARCH_MID])             # execute blast to find mids
      # blast_table_results.inspect
      