plugin_amplicons.rb in seqtrimnext-2.0.46

- old
+ new

@@ -23,11 +23,11 @@
   end
 
   def do_blasts(seqs)
     # find MIDS  with less results than max_target_seqs value
     blast=BatchBlast.new("-db #{@params.get_param('primers_db')}",'blastn'," -task blastn-short -perc_identity #{@params.get_param('blast_percent_primers')}")
-    $LOG.info('BLAST:'+blast.get_blast_cmd)
+    $LOG.debug('BLAST:'+blast.get_blast_cmd)
 
     fastas=[]
 
     seqs.each do |seq|
       fastas.push ">"+seq.seq_name
@@ -47,10 +47,10 @@
   def exec_seq(seq,blast_query)
     if blast_query.query_id != seq.seq_name
       raise "Blast and seq names does not match, blast:#{blast_query.query_id} sn:#{seq.seq_name}"
     end
 
-    $LOG.info "[#{self.class.to_s}, seq: #{seq.seq_name}]: looking for primers into the sequence"
+    $LOG.debug "[#{self.class.to_s}, seq: #{seq.seq_name}]: looking for primers into the sequence"
 
     # puts blast_query.inspect
     
     # merge hits
     # primers=blast_query.merged_hits!