lib/seqtrimnext/plugins/plugin.rb in seqtrimnext-2.0.49 vs lib/seqtrimnext/plugins/plugin.rb in seqtrimnext-2.0.50
- old
+ new
@@ -77,10 +77,9 @@
merged_ids.push hit.definition if !merged_ids.nil? && (! merged_ids.include?(hit.definition))
# if new hit's position is already contained in hits, then ignore the new hit
c=merged_hits.find{|c| overlapX?(hit.q_beg, hit.q_end,c.q_beg,c.q_end)}
# puts " c #{c.inspect}"
-
if (c.nil?)
# add new contaminant
#puts "NEW HIT #{hit.inspect}"
merged_hits.push(hit.dup)
#contaminants.push({:q_begin=>hit.q_beg,:q_end=>hit.q_end,:name=>hit.subject_id})