lib/seqtrimnext/classes/plugin_manager.rb in seqtrimnext-2.0.51 vs lib/seqtrimnext/classes/plugin_manager.rb in seqtrimnext-2.0.52
- old
+ new
@@ -27,11 +27,10 @@
if !@plugin_names.empty?
# keeps a list of rejected sequences
-
rejected_seqs = []
@plugin_names.each do |plugin_name|
@@ -49,14 +48,13 @@
break
end
# Creates an instance of the respective plugin stored in "plugin_name",and asociate it to the sequence 'seq'
plugin_class = Object.const_get(plugin_name)
- # puts "ANTES *************" + seq.to_text_seq_fasta
+
plugin_execution=plugin_class.new(running_seqs,@params)
- #puts plugin_name+':'+ plugin_execution.stats.to_json
- running_seqs.stats[plugin_name] = plugin_execution.stats
+ running_seqs.stats[plugin_name] = plugin_execution.stats
# puts running_seqs.stats.to_json
plugin_execution=nil