lib/egor/cli.rb in semin-egor-0.9.1 vs lib/egor/cli.rb in semin-egor-0.9.2

@@ -70,10 +70,10 @@
     --add DOUBLE: add this value to raw counts when deriving log-odds without smoothing (default 1/#classes)
     --pidmin DOUBLE: count substitutions only for pairs with PID equal to or greater than this value (default none)
     --pidmax DOUBLE: count substitutions only for pairs with PID smaller than this value (default none)
     --heatmap INTEGER:
         0 create a heat map file for each substitution table
-        1 create one big file containing all substitution tables
+        1 create one big file containing all heat maps from substitution tables
         2 do both 0 and 1
     --heatmap-format INTEGER:
         0 for Portable Network Graphics (PNG) Format (default)
         1 for Graphics Interchange Format (GIF)
         2 for Joint Photographic Experts Group (JPEG) Format