features/support/env.rb in scaffolder-0.4.3 vs features/support/env.rb in scaffolder-0.4.4
- old
+ new
@@ -5,26 +5,16 @@
$stderr.puts e.message
$stderr.puts "Run `bundle install` to install missing gems"
exit e.status_code
end
-require 'tempfile'
+require 'rspec/expectations'
+require 'aruba/cucumber'
$LOAD_PATH.unshift(File.dirname(__FILE__) + '/../../lib')
require 'scaffolder'
-def write_sequence_file(*sequences)
- file = Tempfile.new("sequence").path
- File.open(file,'w') do |tmp|
- sequences.flatten.each do |sequence|
- seq = Bio::Sequence.new(sequence[:sequence])
- tmp.print(seq.output(:fasta,:header => sequence[:name]))
- end
- end
- file
-end
+TMP = "/tmp"
-def write_scaffold_file(scaffold)
- file = Tempfile.new("scaffold").path
- File.open(file,'w'){|tmp| tmp.print(YAML.dump(scaffold))}
- file
+Before do
+ @dirs = [TMP]
end