lib/scaffolder/test/helpers.rb in scaffolder-test-helpers-0.3.0 vs lib/scaffolder/test/helpers.rb in scaffolder-test-helpers-0.4.0

@@ -2,10 +2,11 @@
 require 'bio'
 require 'scaffolder'
 
 require 'scaffolder/test/sequence'
 require 'scaffolder/test/unresolved'
+require 'scaffolder/test/annotation'
 
 module Scaffolder::Test
   module Helpers
 
     def generate_scaffold_files(entries)
@@ -26,8 +27,14 @@
         end
       end
       file
     end
 
+    def generate_gff3_file(records,file = Tempfile.new("gff"))
+      gff = Bio::GFF::GFF3.new
+      gff.records = records.map{|r| r.to_gff3_record}
+      File.open(file.path,'w'){|out| out.print(gff) }
+      file
+    end
 
   end
 end