Doxyfile in rice-2.1.1 vs Doxyfile in rice-2.1.2

@@ -731,11 +731,11 @@
 # documented source files. You may enter file names like myfile.cpp or
 # directories like /usr/src/myproject. Separate the files or directories with
 # spaces.
 # Note: If this tag is empty the current directory is searched.
 
-INPUT                  = rice
+INPUT                  = rice README.md
 
 # This tag can be used to specify the character encoding of the source files
 # that doxygen parses. Internally doxygen uses the UTF-8 encoding. Doxygen uses
 # libiconv (or the iconv built into libc) for the transcoding. See the libiconv
 # documentation (see: http://www.gnu.org/software/libiconv) for the list of
@@ -751,11 +751,11 @@
 # *.ixx, *.ipp, *.i++, *.inl, *.idl, *.ddl, *.odl, *.h, *.hh, *.hxx, *.hpp,
 # *.h++, *.cs, *.d, *.php, *.php4, *.php5, *.phtml, *.inc, *.m, *.markdown,
 # *.md, *.mm, *.dox, *.py, *.f90, *.f, *.for, *.tcl, *.vhd, *.vhdl, *.ucf,
 # *.qsf, *.as and *.js.
 
-FILE_PATTERNS          = *.hpp README.doxygen
+FILE_PATTERNS          = *.hpp
 
 # The RECURSIVE tag can be used to specify whether or not subdirectories should
 # be searched for input files as well.
 # The default value is: NO.
 
@@ -867,11 +867,11 @@
 # If the USE_MDFILE_AS_MAINPAGE tag refers to the name of a markdown file that
 # is part of the input, its contents will be placed on the main page
 # (index.html). This can be useful if you have a project on for instance GitHub
 # and want to reuse the introduction page also for the doxygen output.
 
-USE_MDFILE_AS_MAINPAGE =
+USE_MDFILE_AS_MAINPAGE = README.md
 
 #---------------------------------------------------------------------------
 # Configuration options related to source browsing
 #---------------------------------------------------------------------------
 
@@ -1776,21 +1776,9 @@
 # it.
 # The default directory is: xml.
 # This tag requires that the tag GENERATE_XML is set to YES.
 
 XML_OUTPUT             = xml
-
-# The XML_SCHEMA tag can be used to specify a XML schema, which can be used by a
-# validating XML parser to check the syntax of the XML files.
-# This tag requires that the tag GENERATE_XML is set to YES.
-
-XML_SCHEMA             =
-
-# The XML_DTD tag can be used to specify a XML DTD, which can be used by a
-# validating XML parser to check the syntax of the XML files.
-# This tag requires that the tag GENERATE_XML is set to YES.
-
-XML_DTD                =
 
 # If the XML_PROGRAMLISTING tag is set to YES doxygen will dump the program
 # listings (including syntax highlighting and cross-referencing information) to
 # the XML output. Note that enabling this will significantly increase the size
 # of the XML output.