lib/rbbt/association/item.rb in rbbt-util-5.14.14 vs lib/rbbt/association/item.rb in rbbt-util-5.14.15

@@ -21,10 +21,18 @@
 
   property :source => :array2single do
     self.clean_annotations.collect{|p| p[/[^~]+/] }
   end
 
+  property :target_entity_type => :both do
+    Entity.formats[target_type].to_s
+  end
+
+  property :source_entity_type => :both do
+    Entity.formats[source_type].to_s
+  end
+
   property :target_type => :both do
     type = reverse ? knowledge_base.source(database) : knowledge_base.target(database)
   end
 
   property :source_type => :both do
@@ -66,9 +74,13 @@
     fields = [self.source_type, self.target_type].concat info_fields
     type = [self.source_type, self.target_type] * "~"
     tsv = TSV.setup({}, :key_field => type, :fields => fields, :type => :list, :namespace => self.namespace)
     self.each do |match|
       tsv[match] = [match.source, match.target].concat match.info.values_at(*info_fields)
+    end
+    tsv.entity_options = {:organism => namespace}
+    knowledge_base.entity_options.each do |type,options|
+      tsv.entity_options.merge! options
     end
     tsv
   end
 
   def self.incidence(pairs, key_field = nil)