Rakefile in rbbt-sources-3.1.0

- old
+ new
@@ -46,24 +46,31 @@
   #[ 'Agilent WholeGenome',"agilent_wholegenome" ],
   [ 'Agilent CGH 44b', 'agilent_cgh_44b' ],
   [ 'Codelink ID', 'codelink' ],
   [ 'Illumina HumanWG 6 v2', 'illumina_humanwg_6_v2' ],
   [ 'Illumina HumanWG 6 v3', 'illumina_humanwg_6_v3' ],
+  [ 'RefSeq mRNA' , "refseq_mrna"] , 
+  [ 'RefSeq ncRNA' , "refseq_ncrna"] , 
+  [ 'RefSeq mRNA predicted' , "refseq_mrna_predicted"] , 
+  [ 'RefSeq ncRNA predicted' , "refseq_ncrna_predicted"] , 
 ]
 
 $biomart_identifiers = [ 
   [ 'Entrez Gene ID', "entrezgene"],
   [ 'Ensembl Protein ID', "ensembl_peptide_id"  ],
   [ 'Associated Gene Name', "external_gene_name"  ],
   [ 'CCDS ID', "ccds"  ],
   [ 'Protein ID', "protein_id"  ],
+  [ 'RefSeq mRNA' , "refseq_mrna"] , 
+  [ 'RefSeq ncRNA' , "refseq_ncrna"] , 
+  [ 'RefSeq mRNA predicted' , "refseq_mrna_predicted"] , 
+  [ 'RefSeq ncRNA predicted' , "refseq_ncrna_predicted"] , 
   [ 'RefSeq Protein ID', "refseq_peptide"  ],
   [ 'Unigene ID', "unigene"  ],
   [ 'UniProt/SwissProt ID', "uniprot_swissprot"  ],
   [ 'UniProt/SwissProt Accession', "uniprot_swissprot_accession"  ],
   [ 'HGNC ID', "hgnc_id", 'HGNC'],
   #[ 'EMBL (Genbank) ID' , "embl"] , 
-  #[ 'RefSeq mRNA' , "refseq_mrna"] , 
 
   # Probes
   [ 'AFFY HC G110', 'affy_hc_g110' ],
   [ 'AFFY HG FOCUS', 'affy_hg_focus' ],
   [ 'AFFY HG U133-PLUS-2', 'affy_hg_u133_plus_2' ],