lib/rbbt/sources/organism.rb in rbbt-sources-3.2.6 vs lib/rbbt/sources/organism.rb in rbbt-sources-3.2.8

@@ -66,10 +66,13 @@
     claim Organism[organism], :rake, Rbbt.share.install.Organism[organism].Rakefile.find
 
     module_eval "#{ organism } = with_key '#{organism}'"
   end
 
-  Rbbt.claim Rbbt.software.opt.bin.liftOver, :url, "http://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/liftOver"
+  Rbbt.claim Rbbt.software.opt.bin.liftOver, :proc do |file|
+    url = "http://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/liftOver"
+    CMD.cmd_log("wget '#{url}' -O '#{file}' && chmod +rx #{file}")
+  end
 
   def self.hg_build(organism)
     require 'rbbt/sources/ensembl_ftp'
     organism = organism.strip 
     return organism if organism =~ /^hg\d\d$/