lib/rbbt/sources/organism.rb in rbbt-sources-3.2.14 vs lib/rbbt/sources/organism.rb in rbbt-sources-3.2.15

- old
+ new

@@ -71,9 +71,10 @@ Rbbt.claim Rbbt.software.opt.bin.liftOver, :proc do |file| Open.mkdir File.dirname(file) unless File.directory?(file) url = "http://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/liftOver" CMD.cmd_log("wget '#{url}' -O '#{file}'") CMD.cmd("chmod 0755 '#{file}'") + Rbbt.set_software_env nil end CMD.tool :liftOver, Rbbt.software.opt.bin.liftOver