lib/workers/system.rb in quorum-0.7.1 vs lib/workers/system.rb in quorum-0.8.0
- old
+ new
@@ -92,11 +92,13 @@
# Create search command based on config/quorum_settings.yml
#
def self.create_search_command(algo, id)
# System command
cmd = ""
+ return cmd unless Quorum::SUPPORTED_ALGORITHMS.include?(algo)
- if Quorum::BLAST_ALGORITHMS.include?(algo)
+ case
+ when Quorum::BLAST_ALGORITHMS.include?(algo)
search = File.join(Quorum.blast_bin, "search")
cmd << "#{search} -l #{Quorum.blast_log_dir} " <<
"-m #{Quorum.blast_tmp_dir} -b #{Quorum.blast_db} " <<
"-t #{Quorum.blast_threads} "
else