lib/parse_fasta.rb in parse_fasta-1.9.2 vs lib/parse_fasta.rb in parse_fasta-2.0.0

- old
+ new

@@ -1,6 +1,6 @@ -# Copyright 2014, 2015 Ryan Moore +# Copyright 2014 - 2016 Ryan Moore # Contact: moorer@udel.edu # # This file is part of parse_fasta. # # parse_fasta is free software: you can redistribute it and/or modify @@ -14,27 +14,12 @@ # GNU General Public License for more details. # # You should have received a copy of the GNU General Public License # along with parse_fasta. If not, see <http://www.gnu.org/licenses/>. -require 'parse_fasta/version' -require 'parse_fasta/fasta_file' -require 'parse_fasta/fastq_file' -require 'parse_fasta/seq_file' -require 'parse_fasta/sequence' -require 'parse_fasta/quality' +require "parse_fasta/version" +require "parse_fasta/record" +require "parse_fasta/seq_file" +require "parse_fasta/error" module ParseFasta - - class Error < StandardError - end - - # Error raised when FASTA file is malformed - class DataFormatError < IOError - def message - "Data format error -- check input file" - end - end - - class SequenceFormatError < Error - end end