specs/spec_id/sqt_spec.rb in mspire-0.3.9 vs specs/spec_id/sqt_spec.rb in mspire-0.4.2

@@ -108,11 +108,11 @@
       @output.exist_as_a_file?.should be_true
       IO.readlines(@output).size.should == 80910
       del(@output)
     end
     it 'can get db info with correct path' do
-      @srf.to_sqt(@output, :db_info => true, :new_db_path => Tfiles_l + '/opd1_2runs_2mods/sequest')
+      @srf.to_sqt(@output, :db_info => true, :new_db_path => Tfiles_l + '/opd1_2runs_2mods/sequest33')
       @output.exist_as_a_file?.should be_true
       lines = IO.readlines(@output)
       has_md5 = lines.any? do |line|
         line =~ /DBMD5Sum\s+202b1d95e91f2da30191174a7f13a04e/
       end
@@ -125,12 +125,12 @@
       has_seq_len.should be_true
       lines.size.should == 80912
       del(@output)
     end
     it 'can update the Database' do
-      @srf.to_sqt(@output, :new_db_path => Tfiles_l + '/opd1_2runs_2mods/sequest', :update_db_path => true)
-      regexp = Regexp.new("Database\t/.*/opd1_2runs_2mods/sequest/ecoli_K12_ncbi_20060321.fasta")
+      @srf.to_sqt(@output, :new_db_path => Tfiles_l + '/opd1_2runs_2mods/sequest33', :update_db_path => true)
+      regexp = Regexp.new("Database\t/.*/opd1_2runs_2mods/sequest33/ecoli_K12_ncbi_20060321.fasta")
       updated_db = IO.readlines(@output).any? do |line|
         line =~ regexp
       end
       updated_db.should be_true
       del(@output)
@@ -215,11 +215,11 @@
 end
 
 describe SQTGroup, ': acting as a SpecID on large files' do
   spec_large do 
     before(:each) do
-      file1 = Tfiles_l + '/opd1_2runs_2mods/sequest/020.sqt'
-      file2 = Tfiles_l + '/opd1_2runs_2mods/sequest/040.sqt'
+      file1 = Tfiles_l + '/opd1_2runs_2mods/sequest33/020.sqt'
+      file2 = Tfiles_l + '/opd1_2runs_2mods/sequest33/040.sqt'
       file1.exist_as_a_file?.should be_true
       file2.exist_as_a_file?.should be_true
       @sqg = SQTGroup.new([file1, file2])
     end