Rakefile in mspire-0.8.6.2 vs Rakefile in mspire-0.8.7

@@ -1,66 +1,20 @@
-require 'rubygems'
-require 'rake'
-require 'rspec/core/rake_task'
-require 'yard'
+require "bundler/gem_tasks"
 
-require 'jeweler'
-Jeweler::Tasks.new do |gem|
-  # gem is a Gem::Specification... see http://docs.rubygems.org/read/chapter/20 for more options
-  gem.name = "mspire"
-  gem.homepage = "http://github.com/princelab/mspire"
-  gem.license = "MIT"
-  gem.summary = %Q{mass spectrometry proteomics, lipidomics, and tools}
-  gem.description = %Q{mass spectrometry proteomics, lipidomics, and tools, a rewrite of mspire, merging of ms-* gems}
-  gem.email = "[e-mail]"
-  gem.authors = ["John T. Prince", "Simon Chiang"]
-  gem.add_dependency "nokogiri", "~> 1.5.9"
-  gem.add_dependency "bsearch", ">= 1.5.0"
-  gem.add_dependency "andand", ">= 1.3.3"
-  gem.add_dependency "obo", ">= 0.1.3"
-  gem.add_dependency "builder", "~> 3.2.0"
-  gem.add_dependency "bio", "~> 1.4.3"
-  gem.add_dependency "trollop", "~> 2.0.0"
-  # this should be a real dependency, but need to document getting this
-  # working on windows first!
-  gem.add_development_dependency "fftw3", "~> 0.3"
-  gem.add_development_dependency "rspec", "~> 2.13"
-  gem.add_development_dependency "jeweler", "~> 1.8.4"
-  #gem.add_development_dependency "rcov", ">= 0"
-end
-Jeweler::RubygemsDotOrgTasks.new
-
 require 'rspec/core'
 require 'rspec/core/rake_task'
 RSpec::Core::RakeTask.new(:spec) do |spec|
   spec.pattern = FileList['spec/**/*_spec.rb']
 end
 
-YARD::Rake::YardocTask.new do |t|
-  t.files   = ['lib/**/*.rb', 'obo/**/*', 'README.md', 'script/**/*']   # optional
-  #t.options = ['--any', '--extra', '--opts'] # optional
-end
-
-RSpec::Core::RakeTask.new(:rcov) do |spec|
-  spec.pattern = 'spec/**/*_spec.rb'
-  spec.rcov = true
-end
-
-#require 'rcov/rcovtask'
-#Rcov::RcovTask.new do |spec|
-#  spec.libs << 'spec'
-#  spec.pattern = 'spec/**/*_spec.rb'
-#  spec.verbose = true
-#end
-
 task :default => :spec
 
 require 'rdoc/task'
 Rake::RDocTask.new do |rdoc|
   version = File.exist?('VERSION') ? File.read('VERSION') : ""
 
   rdoc.rdoc_dir = 'rdoc'
-  rdoc.title = "mspire #{version}"
+  rdoc.title = "rubabel #{version}"
   rdoc.rdoc_files.include('README*')
   rdoc.rdoc_files.include('lib/**/*.rb')
 end
 
 desc "downloads the latest obo to appropriate spot"