bin/convert_visit.rb in metamri-0.2.19 vs bin/convert_visit.rb in metamri-0.2.20

@@ -40,10 +40,10 @@
   v = VisitRawDataDirectory.new(raw_directory, scan_procedure_codename)
   puts "+++ Converting #{v.visit_directory} as part of #{v.scan_procedure_name} +++"
   output_directory = output_directory ||= v.default_preprocess_directory
 
   begin
-    default_options = {:ignore_patterns => [/vipr/,/$Processed-Images$/,/900$/,/901$/,/999$/]}  # seems to like number , not like string
+    default_options = {:ignore_patterns => [/vipr/,/pfiles/,/raw/,/$Processed-Images$/,/900$/,/901$/,/999$/]}  # seems to like number , not like string
     #options = default_options.merge(options)
     v.scan(default_options)
     v.to_nifti!(output_directory)
   rescue Exception => e
     puts "There was a problem scanning a dataset in #{v.visit_directory}... skipping."