lib/macroape/cli/preprocess_collection.rb in macroape-4.0.1 vs lib/macroape/cli/preprocess_collection.rb in macroape-4.0.2

@@ -88,9 +88,10 @@
           filelist = $stdin.read.shellsplit
           motifs = []
           filelist.each do |filename|
             motif = data_model.new(File.read(filename))
             motif.name ||= File.basename(filename, File.extname(filename))
+            motif.set_parameters(background: background)
             motifs << motif
           end
         else
           raise "Specified data source `#{data_source}` is neither directory nor file nor even .stdin"
         end
\ No newline at end of file