exe/iroki in iroki-0.0.31 vs exe/iroki in iroki-0.0.32
- old
+ new
@@ -57,12 +57,11 @@
opt(:biom,
"Biom file to make color gradient",
type: :string)
opt(:single_color,
- "Use single color gradient for single group biom files",
- type: :string)
+ "Use single color gradient for single group biom files")
opt(:name_map,
"File with name mappings",
type: :string)
@@ -83,10 +82,21 @@
opt(:default_color,
"Default color",
type: :string,
default: "black")
+
+ opt(:min_lumin,
+ "Min luminosity (only used for gradients)",
+ type: :int,
+ default: 35)
+
+ opt(:max_lumin,
+ "Max luminosity (only used for gradients)",
+ type: :int,
+ default: 70)
+
end
Iroki::Main.main(
color_branches: opts[:color_branches],
color_taxa_names: opts[:color_taxa_names],
@@ -98,7 +108,9 @@
name_map_f: opts[:name_map],
auto_color: opts[:auto_color],
display_auto_color_options: opts[:display_auto_color_options],
newick_f: opts[:infile],
out_f: opts[:outfile],
- default_color: opts[:default_color]
+ default_color: opts[:default_color],
+ min_lumin: opts[:min_lumin],
+ max_lumin: opts[:max_lumin]
)