lib/bio/sequence/format.rb in bio-1.3.1 vs lib/bio/sequence/format.rb in bio-1.4.0

@@ -45,9 +45,25 @@
 
     # NCBI-style Fasta format generatar
     # (resemble to EMBOSS "ncbi" format)
     autoload :Fasta_ncbi, 'bio/db/fasta/format_fasta'
 
+    # FASTQ "fastq-sanger" format generator
+    autoload :Fastq, 'bio/db/fastq/format_fastq'
+    # FASTQ "fastq-sanger" format generator
+    autoload :Fastq_sanger, 'bio/db/fastq/format_fastq'
+    # FASTQ "fastq-solexa" format generator
+    autoload :Fastq_solexa, 'bio/db/fastq/format_fastq'
+    # FASTQ "fastq-illumina" format generator
+    autoload :Fastq_illumina, 'bio/db/fastq/format_fastq'
+
+    # FastaNumericFormat format generator
+    autoload :Fasta_numeric, 'bio/db/fasta/format_qual'
+    # Qual format generator.
+    # Its format is the same as Fasta_numeric, but it would perform
+    # to convert quality score or generates scores from error probability.
+    autoload :Qual, 'bio/db/fasta/format_qual'
+
   end #module Formatter
 
   # Repository of nucleotide sequence formatter classes
   module NucFormatter