lib/bio/db/embl/embl.rb in bio-0.7.1 vs lib/bio/db/embl/embl.rb in bio-1.0.0
- old
+ new
@@ -3,23 +3,31 @@
#
#
# Copyright:: Copyright (C) 2001-2005 Mitsuteru C. Nakao <n@bioruby.org>
# License:: LGPL
#
-# $Id: embl.rb,v 1.25 2005/11/02 07:30:14 nakao Exp $
+# $Id: embl.rb,v 1.26 2006/01/28 06:40:38 nakao Exp $
#
-# == EMBL database entry
+# == Description
#
+# Parser class for EMBL database entry.
#
-#
-# == Example
+# == Examples
#
-# emb = Bio::EMBL.new($<.read)
-# emb.entry_id
-# emb.each_cds do |cds|
-# cds
-# end
-# emb.seq
+# emb = Bio::EMBL.new($<.read)
+# emb.entry_id
+# emb.each_cds do |cds|
+# cds # A CDS in feature table.
+# end
+# emb.seq #=> "ACGT..."
+#
+# == References
+#
+# * The EMBL Nucleotide Sequence Database
+# http://www.ebi.ac.uk/embl/
+#
+# * The EMBL Nucleotide Sequence Database: Users Manual
+# http://www.ebi.ac.uk/embl/Documentation/User_manual/usrman.html
#
#--
#
# This library is free software; you can redistribute it and/or
# modify it under the terms of the GNU Lesser General Public